RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ZNF772Q68DY9 489 aaPredicted RBP9.43□□□□□ -0.9
GYPB-212ENST00000511198 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
GYPB-212ENST00000511198 DNAJB12Q9NXW2 375 aaKnown RBP9.43□□□□□ -0.9
GYPB-212ENST00000511198 SLC6A14Q9UN76 642 aa9.43□□□□□ -0.9
GYPB-212ENST00000511198 RTCBQ9Y3I0 505 aaKnown RBP9.43□□□□□ -0.9
GYPB-212ENST00000511198 CDK12Q9NYV4 1490 aaPredicted RBP9.42□□□□□ -0.9
GYPB-212ENST00000511198 CNTLNQ9NXG0 1405 aa9.42□□□□□ -0.9
GYPB-212ENST00000511198 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
GYPB-212ENST00000511198 MAP3K6O95382 1288 aa9.42□□□□□ -0.9
GYPB-212ENST00000511198 BRD2P25440 801 aaKnown RBP9.42□□□□□ -0.9
GYPB-212ENST00000511198 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
GYPB-212ENST00000511198 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
GYPB-212ENST00000511198 SPOCK3Q9BQ16 436 aa9.42□□□□□ -0.9
GYPB-212ENST00000511198 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
GYPB-212ENST00000511198 SASH3O75995 380 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 EGFRP00533 1210 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 PROCP04070 461 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 ATP2B4P23634 1241 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 YY1P25490 414 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 RGL4Q8IZJ4 473 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 KCNMB2Q9Y691 235 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 POLR1AO95602 1720 aaPredicted RBP9.41□□□□□ -0.9
GYPB-212ENST00000511198 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
GYPB-212ENST00000511198 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
GYPB-212ENST00000511198 MSTNO14793 375 aa9.4□□□□□ -0.9
GYPB-212ENST00000511198 NID1P14543 1247 aa9.4□□□□□ -0.9
GYPB-212ENST00000511198 AFAP1Q8N556 730 aa9.4□□□□□ -0.9
GYPB-212ENST00000511198 NAGPAQ9UK23 515 aa9.4□□□□□ -0.9
GYPB-212ENST00000511198 LRP6O75581 1613 aa9.4□□□□□ -0.9
GYPB-212ENST00000511198 DNMT1P26358 1616 aaKnown RBP9.4□□□□□ -0.9
GYPB-212ENST00000511198 GOLGA3Q08378 1498 aa9.4□□□□□ -0.91
GYPB-212ENST00000511198 MROH2AA6NES4 1674 aa9.39□□□□□ -0.91
GYPB-212ENST00000511198 ZBTB42B2RXF5 422 aa9.39□□□□□ -0.91
GYPB-212ENST00000511198 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
GYPB-212ENST00000511198 DHX32Q7L7V1 743 aaKnown RBP9.38□□□□□ -0.91
GYPB-212ENST00000511198 SEPT3Q9UH03 358 aa9.38□□□□□ -0.91
GYPB-212ENST00000511198 LRP5O75197 1615 aa9.38□□□□□ -0.91
GYPB-212ENST00000511198 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 LILRB5O75023 590 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 XYLBO75191 536 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 RARAP10276 462 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 CD163Q86VB7 1156 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 TRPM4Q8TD43 1214 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 RGS12O14924 1447 aa9.37□□□□□ -0.91
GYPB-212ENST00000511198 XIRP1Q702N8 1843 aaKnown RBP9.36□□□□□ -0.91
GYPB-212ENST00000511198 A2ML1A8K2U0 1454 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 ABCA6Q8N139 1617 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 ZBTB39O15060 712 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 SCNN1AP37088 669 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 CHRNA4P43681 627 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 PSAPL1Q6NUJ1 521 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 NUDT8Q8WV74 236 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 STIM2Q9P246 746 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 JCADQ9P266 1359 aa9.36□□□□□ -0.91
GYPB-212ENST00000511198 RAPGEF6Q8TEU7 1601 aa9.35□□□□□ -0.91
GYPB-212ENST00000511198 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
GYPB-212ENST00000511198 AFF1P51825 1210 aaKnown RBP9.35□□□□□ -0.91
GYPB-212ENST00000511198 TRIP4Q15650 581 aaPredicted RBP9.35□□□□□ -0.91
GYPB-212ENST00000511198 PCSK7Q16549 785 aa9.35□□□□□ -0.91
GYPB-212ENST00000511198 FAM35AQ86V20 835 aa9.35□□□□□ -0.91
GYPB-212ENST00000511198 JPH1Q9HDC5 661 aaPredicted RBP9.35□□□□□ -0.91
GYPB-212ENST00000511198 ROBO1Q9Y6N7 1651 aa9.35□□□□□ -0.91
GYPB-212ENST00000511198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.35□□□□□ -0.91
GYPB-212ENST00000511198 SYNMO15061 1565 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 PLCH2O75038 1416 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 NPHP4O75161 1426 aaPredicted RBP9.34□□□□□ -0.91
GYPB-212ENST00000511198 EP400Q96L91 3159 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 PLEKHD1A6NEE1 506 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 SSFA2P28290 1259 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 GPLD1P80108 840 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 ANKLE2Q86XL3 938 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 TLR7Q9NYK1 1049 aaKnown RBP9.34□□□□□ -0.91
GYPB-212ENST00000511198 MED14O60244 1454 aa9.34□□□□□ -0.91
GYPB-212ENST00000511198 KDM5CP41229 1560 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 MMP20O60882 483 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 CPB1P15086 417 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 ZAP70P43403 619 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 MLLT1Q03111 559 aaPredicted RBP9.33□□□□□ -0.92
GYPB-212ENST00000511198 PERM1Q5SV97 790 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 MEX3CQ5U5Q3 659 aaKnown RBP9.33□□□□□ -0.92
GYPB-212ENST00000511198 LPIN3Q9BQK8 851 aa9.33□□□□□ -0.92
GYPB-212ENST00000511198 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
GYPB-212ENST00000511198 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
GYPB-212ENST00000511198 RGS9O75916 674 aaPredicted RBP9.32□□□□□ -0.92
GYPB-212ENST00000511198 NRLP54845 237 aa9.32□□□□□ -0.92
GYPB-212ENST00000511198 PLAURQ03405 335 aa9.32□□□□□ -0.92
GYPB-212ENST00000511198 GRIK5Q16478 980 aa9.32□□□□□ -0.92
GYPB-212ENST00000511198 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
GYPB-212ENST00000511198 ZNF518AQ6AHZ1 1483 aa9.32□□□□□ -0.92
GYPB-212ENST00000511198 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
GYPB-212ENST00000511198 CEP350Q5VT06 3117 aa9.31□□□□□ -0.92
GYPB-212ENST00000511198 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
GYPB-212ENST00000511198 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
GYPB-212ENST00000511198 PHLDB3Q6NSJ2 640 aa9.31□□□□□ -0.92
GYPB-212ENST00000511198 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
GYPB-212ENST00000511198 PIK3R5Q8WYR1 880 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms