RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 C9orf78Q9NZ63 289 aaPredicted RBP15.26■□□□□ 0.03
CHFR-208ENST00000511001 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
CHFR-208ENST00000511001 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
CHFR-208ENST00000511001 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
CHFR-208ENST00000511001 ALDH1L2Q3SY69 923 aa15.25■□□□□ 0.03
CHFR-208ENST00000511001 RBM26Q5T8P6 1007 aaKnown RBP15.25■□□□□ 0.03
CHFR-208ENST00000511001 ZNF594Q96JF6 807 aaPredicted RBP15.25■□□□□ 0.03
CHFR-208ENST00000511001 CHMP3Q9Y3E7 222 aa15.25■□□□□ 0.03
CHFR-208ENST00000511001 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 KIF4BQ2VIQ3 1234 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 DACT2Q5SW24 774 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 DLK2Q6UY11 383 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
CHFR-208ENST00000511001 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 ABT1Q9ULW3 272 aaKnown RBP15.24■□□□□ 0.03
CHFR-208ENST00000511001 TLL2Q9Y6L7 1015 aa15.24■□□□□ 0.03
CHFR-208ENST00000511001 ASTN2O75129 1339 aaPredicted RBP15.23■□□□□ 0.03
CHFR-208ENST00000511001 TAF5LO75529 589 aa15.23■□□□□ 0.03
CHFR-208ENST00000511001 CELF2O95319 508 aaKnown RBP15.23■□□□□ 0.03
CHFR-208ENST00000511001 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
CHFR-208ENST00000511001 MXD3Q9BW11 206 aa15.23■□□□□ 0.03
CHFR-208ENST00000511001 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
CHFR-208ENST00000511001 CTCFP49711 727 aaPredicted RBP15.22■□□□□ 0.03
CHFR-208ENST00000511001 CCDC57Q2TAC2 916 aa15.22■□□□□ 0.03
CHFR-208ENST00000511001 RABL6Q3YEC7 729 aaPredicted RBP15.22■□□□□ 0.03
CHFR-208ENST00000511001 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
CHFR-208ENST00000511001 CT47B1P0C2W7 299 aaPredicted RBP15.21■□□□□ 0.03
CHFR-208ENST00000511001 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 STRIP1Q5VSL9 837 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 ANKRD44Q8N8A2 993 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 BICC1Q9H694 974 aaKnown RBP15.21■□□□□ 0.03
CHFR-208ENST00000511001 CD209Q9NNX6 404 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 GGA3Q9NZ52 723 aa15.21■□□□□ 0.03
CHFR-208ENST00000511001 ADM5C9JUS6 153 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 KCNJ4P48050 445 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 LBX1P52954 281 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
CHFR-208ENST00000511001 TAF7LQ5H9L4 462 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 SAPCD2Q86UD0 394 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 MIER1Q8N108 512 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 PUS3Q9BZE2 481 aaKnown RBP15.2■□□□□ 0.02
CHFR-208ENST00000511001 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 MYOZ2Q9NPC6 264 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 ECM29Q5VYK3 1845 aa15.2■□□□□ 0.02
CHFR-208ENST00000511001 SCARF1Q14162 830 aa15.19■□□□□ 0.02
CHFR-208ENST00000511001 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
CHFR-208ENST00000511001 FBXW7Q969H0 707 aa15.19■□□□□ 0.02
CHFR-208ENST00000511001 DCPSQ96C86 337 aaKnown RBP15.19■□□□□ 0.02
CHFR-208ENST00000511001 CNNM1Q9NRU3 951 aa15.19■□□□□ 0.02
CHFR-208ENST00000511001 WBP1LQ9NX94 342 aa15.19■□□□□ 0.02
CHFR-208ENST00000511001 MYO3BQ8WXR4 1341 aa15.18■□□□□ 0.02
CHFR-208ENST00000511001 PLIN1O60240 522 aa15.18■□□□□ 0.02
CHFR-208ENST00000511001 GTF2IP78347 998 aa15.18■□□□□ 0.02
CHFR-208ENST00000511001 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
CHFR-208ENST00000511001 RIPOR2Q9Y4F9 1068 aa15.18■□□□□ 0.02
CHFR-208ENST00000511001 IL1R1P14778 569 aa15.17■□□□□ 0.02
CHFR-208ENST00000511001 ECE1P42892 770 aa15.17■□□□□ 0.02
CHFR-208ENST00000511001 RARSP54136 660 aaKnown RBP15.17■□□□□ 0.02
CHFR-208ENST00000511001 ANGEL2Q5VTE6 544 aaKnown RBP15.17■□□□□ 0.02
CHFR-208ENST00000511001 DIEXFQ68CQ4 756 aaKnown RBP15.17■□□□□ 0.02
CHFR-208ENST00000511001 NOB1Q9ULX3 412 aaKnown RBP15.17■□□□□ 0.02
CHFR-208ENST00000511001 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
CHFR-208ENST00000511001 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
CHFR-208ENST00000511001 AOC2O75106 756 aa15.16■□□□□ 0.02
CHFR-208ENST00000511001 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
CHFR-208ENST00000511001 UBE4AQ14139 1066 aa15.16■□□□□ 0.02
CHFR-208ENST00000511001 NBPF9Q3BBW0 867 aa15.16■□□□□ 0.02
CHFR-208ENST00000511001 LRRC24Q50LG9 513 aa15.16■□□□□ 0.02
CHFR-208ENST00000511001 PAXIP1Q6ZW49 1069 aaPredicted RBP15.16■□□□□ 0.02
CHFR-208ENST00000511001 SULF1Q8IWU6 871 aa15.16■□□□□ 0.02
CHFR-208ENST00000511001 CERS5Q8N5B7 392 aa15.16■□□□□ 0.02
CHFR-208ENST00000511001 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
CHFR-208ENST00000511001 WNT10BO00744 389 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 SLC34A2O95436 690 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
CHFR-208ENST00000511001 ZNF804AQ7Z570 1209 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 KIAA0825Q8IV33 1275 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 KLHDC4Q8TBB5 520 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 CDCA5Q96FF9 252 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 ABHD8Q96I13 439 aa15.15■□□□□ 0.02
CHFR-208ENST00000511001 GBA2Q9HCG7 927 aaPredicted RBP15.15■□□□□ 0.02
CHFR-208ENST00000511001 SCAF8Q9UPN6 1271 aaKnown RBP15.15■□□□□ 0.02
CHFR-208ENST00000511001 PAPPA2Q9BXP8 1791 aa15.14■□□□□ 0.01
CHFR-208ENST00000511001 MYH13Q9UKX3 1938 aa15.14■□□□□ 0.01
CHFR-208ENST00000511001 MMP14P50281 582 aa15.14■□□□□ 0.01
CHFR-208ENST00000511001 HUNKP57058 714 aa15.14■□□□□ 0.01
CHFR-208ENST00000511001 GRM1Q13255 1194 aa15.14■□□□□ 0.01
CHFR-208ENST00000511001 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
CHFR-208ENST00000511001 VGLL2Q8N8G2 317 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms