RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ANP32CO43423 234 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 NTSR2O95665 410 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 SLC10A3P09131 477 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 EMP3P54852 163 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 USP46P62068 366 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 OLFM4Q6UX06 510 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 C7orf43Q8WVR3 580 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 MRS2Q9HD23 443 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 IFT57Q9NWB7 429 aa11.16□□□□□ -0.62
PDPN-209ENST00000510906 IBTKQ9P2D0 1353 aaPredicted RBP11.16□□□□□ -0.62
PDPN-209ENST00000510906 LILRB3O75022 631 aa11.15□□□□□ -0.62
PDPN-209ENST00000510906 HOXB7P09629 217 aa11.15□□□□□ -0.62
PDPN-209ENST00000510906 CRY2Q49AN0 593 aa11.15□□□□□ -0.62
PDPN-209ENST00000510906 PARP10Q53GL7 1025 aa11.15□□□□□ -0.62
PDPN-209ENST00000510906 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
PDPN-209ENST00000510906 SEPT9Q9UHD8 586 aaPredicted RBP11.15□□□□□ -0.62
PDPN-209ENST00000510906 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
PDPN-209ENST00000510906 SLX4Q8IY92 1834 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 KDM2BQ8NHM5 1336 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 LTBP3Q9NS15 1303 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
PDPN-209ENST00000510906 ELL2O00472 640 aaPredicted RBP11.14□□□□□ -0.63
PDPN-209ENST00000510906 HOXA2O43364 376 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 NDUFV2P19404 249 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 GNAI1P63096 354 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
PDPN-209ENST00000510906 QPCTQ16769 361 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 CCDC93Q567U6 631 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 SOGA3Q5TF21 947 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
PDPN-209ENST00000510906 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 LAPTM4BQ86VI4 370 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 UTP14AQ9BVJ6 771 aaKnown RBP11.14□□□□□ -0.63
PDPN-209ENST00000510906 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
PDPN-209ENST00000510906 RIC1Q4ADV7 1423 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
PDPN-209ENST00000510906 TRAK2O60296 914 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 TOMM70O94826 608 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 NLRP10Q86W26 655 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 C8orf58Q8NAV2 365 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
PDPN-209ENST00000510906 DBF4Q9UBU7 674 aaPredicted RBP11.13□□□□□ -0.63
PDPN-209ENST00000510906 SBF1O95248 1867 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 NUP98P52948 1817 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 GLTPD2A6NH11 291 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 ALDH1B1P30837 517 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 HOXA10P31260 410 aaPredicted RBP11.12□□□□□ -0.63
PDPN-209ENST00000510906 SLC51AQ86UW1 340 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 SYNE4Q8N205 404 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 PLBD2Q8NHP8 589 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
PDPN-209ENST00000510906 HYPKQ9NX55 129 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 PCDHB15Q9Y5E8 787 aa11.12□□□□□ -0.63
PDPN-209ENST00000510906 HCLS1P14317 486 aaPredicted RBP11.11□□□□□ -0.63
PDPN-209ENST00000510906 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDPN-209ENST00000510906 CCDC27Q2M243 656 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 SLC10A5Q5PT55 438 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
PDPN-209ENST00000510906 TSPYL6Q8N831 410 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
PDPN-209ENST00000510906 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
PDPN-209ENST00000510906 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
PDPN-209ENST00000510906 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 SNED1Q8TER0 1413 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 ATP5J2-PTCD1G3V325 749 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 TK2O00142 265 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
PDPN-209ENST00000510906 RTKN2Q8IZC4 609 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
PDPN-209ENST00000510906 NLRP3Q96P20 1036 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 CRAMP1Q96RY5 1269 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
PDPN-209ENST00000510906 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
PDPN-209ENST00000510906 ARFGEF2Q9Y6D5 1785 aa11.1□□□□□ -0.63
PDPN-209ENST00000510906 RNF123Q5XPI4 1314 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 POTECB2RU33 542 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 COG6Q9Y2V7 657 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
PDPN-209ENST00000510906 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
PDPN-209ENST00000510906 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
PDPN-209ENST00000510906 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
PDPN-209ENST00000510906 DDNO94850 711 aaPredicted RBP11.08□□□□□ -0.64
PDPN-209ENST00000510906 VEGFAP15692 232 aaPredicted RBP11.08□□□□□ -0.64
PDPN-209ENST00000510906 IARSP41252 1262 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms