RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 LMBR1Q8WVP7 490 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 FBLN1P23142 703 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 STMN4Q9H169 189 aaPredicted RBP12.03□□□□□ -0.48
NEK1-206ENST00000510533 PAG1Q9NWQ8 432 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 CCDC42Q96M95 316 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 IQCGQ9H095 443 aaKnown RBP12.03□□□□□ -0.48
NEK1-206ENST00000510533 CREB3L3Q68CJ9 461 aa12.02□□□□□ -0.48
NEK1-206ENST00000510533 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.48
NEK1-206ENST00000510533 CCDC94Q9BW85 323 aaPredicted RBP12.02□□□□□ -0.48
NEK1-206ENST00000510533 CEP85Q6P2H3 762 aa12.02□□□□□ -0.48
NEK1-206ENST00000510533 IFNKQ9P0W0 207 aa12.02□□□□□ -0.48
NEK1-206ENST00000510533 CUL7Q14999 1698 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 TRAF1Q13077 416 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 PAIP2Q9BPZ3 127 aaKnown RBP12.02□□□□□ -0.49
NEK1-206ENST00000510533 BICDL2A1A5D9 508 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 NAPAP54920 295 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 CCDC6Q16204 474 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
NEK1-206ENST00000510533 GTPBP4Q9BZE4 634 aaKnown RBP12.02□□□□□ -0.49
NEK1-206ENST00000510533 CALM1P0DP23 149 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 CALM2P0DP24 149 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 CALM3P0DP25 149 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 KARSQ15046 597 aaKnown RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 SYT10Q6XYQ8 523 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 ANKS4BQ8N8V4 417 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 UBXN1Q04323 297 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 BRAPQ7Z569 592 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 SPATA24Q86W54 205 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 GUCA1BQ9UMX6 200 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 PA2G4Q9UQ80 394 aaKnown RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 CALML3P27482 149 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 APOBRQ0VD83 1088 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 ZNF569Q5MCW4 686 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 NAA16Q6N069 864 aaPredicted RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 RUFY3Q7L099 469 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 SYNCQ9H7C4 482 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
NEK1-206ENST00000510533 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 GTF2A1P52655 376 aaPredicted RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 CAPZA3Q96KX2 299 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
NEK1-206ENST00000510533 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 TTC14Q96N46 770 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 C6orf50Q9HD87 102 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 VPS18Q9P253 973 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 TNNQ9UQP3 1299 aa12.01□□□□□ -0.49
NEK1-206ENST00000510533 EBAG9O00559 213 aa12□□□□□ -0.49
NEK1-206ENST00000510533 TUBBP07437 444 aa12□□□□□ -0.49
NEK1-206ENST00000510533 KRT2P35908 639 aa12□□□□□ -0.49
NEK1-206ENST00000510533 STX17P56962 302 aa12□□□□□ -0.49
NEK1-206ENST00000510533 NBPF11Q86T75 865 aa12□□□□□ -0.49
NEK1-206ENST00000510533 RLBP1P12271 317 aa12□□□□□ -0.49
NEK1-206ENST00000510533 CCDC121Q6ZUS5 278 aa12□□□□□ -0.49
NEK1-206ENST00000510533 DHX32Q7L7V1 743 aaKnown RBP12□□□□□ -0.49
NEK1-206ENST00000510533 MRVI1Q9Y6F6 885 aa12□□□□□ -0.49
NEK1-206ENST00000510533 RAD50Q92878 1312 aa12□□□□□ -0.49
NEK1-206ENST00000510533 MXRA7P84157 204 aa12□□□□□ -0.49
NEK1-206ENST00000510533 ARID5AQ03989 594 aa12□□□□□ -0.49
NEK1-206ENST00000510533 RGS22Q8NE09 1264 aa12□□□□□ -0.49
NEK1-206ENST00000510533 ZBTB40Q9NUA8 1239 aa12□□□□□ -0.49
NEK1-206ENST00000510533 GNAT2P19087 354 aa12□□□□□ -0.49
NEK1-206ENST00000510533 CHMLP26374 656 aa12□□□□□ -0.49
NEK1-206ENST00000510533 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
NEK1-206ENST00000510533 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
NEK1-206ENST00000510533 KRT79Q5XKE5 535 aa12□□□□□ -0.49
NEK1-206ENST00000510533 MICALL1Q8N3F8 863 aa12□□□□□ -0.49
NEK1-206ENST00000510533 LINS1Q8NG48 757 aa12□□□□□ -0.49
NEK1-206ENST00000510533 NEK11Q8NG66 645 aa12□□□□□ -0.49
NEK1-206ENST00000510533 USP26Q9BXU7 913 aa12□□□□□ -0.49
NEK1-206ENST00000510533 ATP2A1O14983 1001 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 TTLL12Q14166 644 aaPredicted RBP11.99□□□□□ -0.49
NEK1-206ENST00000510533 NBPF6Q5VWK0 638 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 NBPF5PQ86XG9 351 aaPredicted RBP11.99□□□□□ -0.49
NEK1-206ENST00000510533 NBPF4Q96M43 638 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
NEK1-206ENST00000510533 VAMP4O75379 141 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 CHST3Q7LGC8 479 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 SELENOSQ9BQE4 189 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 PHACTR2O75167 634 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 ARFGAP2Q8N6H7 521 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 RHOXF2BP0C7M4 288 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 RHOXF2Q9BQY4 288 aa11.99□□□□□ -0.49
NEK1-206ENST00000510533 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 VAV2P52735 878 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 OTUD6BQ8N6M0 293 aa11.98□□□□□ -0.49
NEK1-206ENST00000510533 OGFRQ9NZT2 677 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms