RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 GRIK4Q16099 956 aa9.65□□□□□ -0.86
SSBP2-214ENST00000510060 COL13A1Q5TAT6 717 aaPredicted RBP9.65□□□□□ -0.86
SSBP2-214ENST00000510060 FBXO11Q86XK2 927 aa9.65□□□□□ -0.86
SSBP2-214ENST00000510060 IL22RA1Q8N6P7 574 aa9.65□□□□□ -0.86
SSBP2-214ENST00000510060 CNTN3Q9P232 1028 aa9.65□□□□□ -0.86
SSBP2-214ENST00000510060 PHACTR2O75167 634 aa9.64□□□□□ -0.87
SSBP2-214ENST00000510060 CEP135Q66GS9 1140 aa9.64□□□□□ -0.87
SSBP2-214ENST00000510060 LENG1Q96BZ8 264 aaPredicted RBP9.64□□□□□ -0.87
SSBP2-214ENST00000510060 PBX4Q9BYU1 374 aa9.64□□□□□ -0.87
SSBP2-214ENST00000510060 CCDC87Q9NVE4 849 aa9.64□□□□□ -0.87
SSBP2-214ENST00000510060 KANSL3Q9P2N6 904 aa9.64□□□□□ -0.87
SSBP2-214ENST00000510060 WDR62O43379 1518 aa9.64□□□□□ -0.87
SSBP2-214ENST00000510060 A6NHS1 94 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 NEFLP07196 543 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 BAG6P46379 1132 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 CEP120Q8N960 986 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 C1orf127Q8N9H9 656 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 SALL4Q9UJQ4 1053 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 TRIM33Q9UPN9 1127 aa9.63□□□□□ -0.87
SSBP2-214ENST00000510060 EDN3P14138 238 aa9.62□□□□□ -0.87
SSBP2-214ENST00000510060 PTPRAP18433 802 aa9.62□□□□□ -0.87
SSBP2-214ENST00000510060 ATP11AP98196 1134 aa9.62□□□□□ -0.87
SSBP2-214ENST00000510060 RASSF4Q9H2L5 321 aa9.62□□□□□ -0.87
SSBP2-214ENST00000510060 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
SSBP2-214ENST00000510060 SELPP16109 830 aa9.61□□□□□ -0.87
SSBP2-214ENST00000510060 CDC27P30260 824 aa9.61□□□□□ -0.87
SSBP2-214ENST00000510060 ARHGAP4P98171 946 aa9.61□□□□□ -0.87
SSBP2-214ENST00000510060 CHRDQ9H2X0 955 aa9.61□□□□□ -0.87
SSBP2-214ENST00000510060 USP21Q9UK80 565 aa9.61□□□□□ -0.87
SSBP2-214ENST00000510060 PPME1Q9Y570 386 aa9.61□□□□□ -0.87
SSBP2-214ENST00000510060 ADGRE1Q14246 886 aa9.6□□□□□ -0.87
SSBP2-214ENST00000510060 FAM117BQ6P1L5 589 aa9.6□□□□□ -0.87
SSBP2-214ENST00000510060 IGF2-ASQ6U949 168 aa9.6□□□□□ -0.87
SSBP2-214ENST00000510060 AMOTL2Q9Y2J4 779 aa9.6□□□□□ -0.87
SSBP2-214ENST00000510060 CADPSQ9ULU8 1353 aa9.6□□□□□ -0.87
SSBP2-214ENST00000510060 MBTPS1Q14703 1052 aa9.59□□□□□ -0.87
SSBP2-214ENST00000510060 LACRTQ9GZZ8 138 aa9.59□□□□□ -0.87
SSBP2-214ENST00000510060 CABP4P57796 275 aa9.58□□□□□ -0.88
SSBP2-214ENST00000510060 ECM1Q16610 540 aa9.58□□□□□ -0.88
SSBP2-214ENST00000510060 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
SSBP2-214ENST00000510060 DZANK1Q9NVP4 752 aa9.58□□□□□ -0.88
SSBP2-214ENST00000510060 SOWAHDA6NJG2 315 aa9.57□□□□□ -0.88
SSBP2-214ENST00000510060 DLL1O00548 723 aa9.57□□□□□ -0.88
SSBP2-214ENST00000510060 EREGO14944 169 aa9.57□□□□□ -0.88
SSBP2-214ENST00000510060 DEAF1O75398 565 aaPredicted RBP9.57□□□□□ -0.88
SSBP2-214ENST00000510060 SHISA2Q6UWI4 295 aa9.57□□□□□ -0.88
SSBP2-214ENST00000510060 ADAM19Q9H013 955 aa9.57□□□□□ -0.88
SSBP2-214ENST00000510060 FOXD3Q9UJU5 478 aaPredicted RBP9.57□□□□□ -0.88
SSBP2-214ENST00000510060 PATL2C9JE40 543 aaKnown RBP9.56□□□□□ -0.88
SSBP2-214ENST00000510060 PDE2AO00408 941 aaPredicted RBP9.56□□□□□ -0.88
SSBP2-214ENST00000510060 SETDB1Q15047 1291 aa9.56□□□□□ -0.88
SSBP2-214ENST00000510060 TMEM102Q8N9M5 508 aaPredicted RBP9.56□□□□□ -0.88
SSBP2-214ENST00000510060 POP1Q99575 1024 aaKnown RBP9.56□□□□□ -0.88
SSBP2-214ENST00000510060 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
SSBP2-214ENST00000510060 ZFYVE28Q9HCC9 887 aa9.56□□□□□ -0.88
SSBP2-214ENST00000510060 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
SSBP2-214ENST00000510060 KCNA1Q09470 495 aa9.55□□□□□ -0.88
SSBP2-214ENST00000510060 WNT8BQ93098 351 aa9.55□□□□□ -0.88
SSBP2-214ENST00000510060 FAM129BQ96TA1 746 aa9.55□□□□□ -0.88
SSBP2-214ENST00000510060 OSMRQ99650 979 aa9.55□□□□□ -0.88
SSBP2-214ENST00000510060 SMARCA4P51532 1647 aa9.55□□□□□ -0.88
SSBP2-214ENST00000510060 H3BRJ5 948 aa9.54□□□□□ -0.88
SSBP2-214ENST00000510060 LINC01387J3KSC0 135 aa9.54□□□□□ -0.88
SSBP2-214ENST00000510060 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
SSBP2-214ENST00000510060 KLHL23Q8NBE8 558 aa9.54□□□□□ -0.88
SSBP2-214ENST00000510060 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
SSBP2-214ENST00000510060 DMRTB1Q96MA1 342 aa9.54□□□□□ -0.88
SSBP2-214ENST00000510060 NFKBIEO00221 500 aa9.53□□□□□ -0.88
SSBP2-214ENST00000510060 DOC2BQ14184 412 aa9.53□□□□□ -0.88
SSBP2-214ENST00000510060 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
SSBP2-214ENST00000510060 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
SSBP2-214ENST00000510060 BIN2Q9UBW5 565 aaPredicted RBP9.53□□□□□ -0.88
SSBP2-214ENST00000510060 CEP164Q9UPV0 1460 aa9.53□□□□□ -0.88
SSBP2-214ENST00000510060 ADAM23O75077 832 aa9.52□□□□□ -0.89
SSBP2-214ENST00000510060 EPHA1P21709 976 aa9.52□□□□□ -0.89
SSBP2-214ENST00000510060 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
SSBP2-214ENST00000510060 NPM2Q86SE8 214 aaKnown RBP9.52□□□□□ -0.89
SSBP2-214ENST00000510060 RBCK1Q9BYM8 510 aa9.52□□□□□ -0.89
SSBP2-214ENST00000510060 FSCN2O14926 492 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 FURINP09958 794 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 ACPPP15309 386 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 CD68P34810 354 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-214ENST00000510060 GALNT12Q8IXK2 581 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 TMEM130Q8N3G9 435 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 WFDC12Q8WWY7 111 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 BSNDQ8WZ55 320 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 NXPE3Q969Y0 559 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 BHLHE41Q9C0J9 482 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-214ENST00000510060 DNAJC25Q9H1X3 360 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 SEC31BQ9NQW1 1179 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-214ENST00000510060 TPSG1Q9NRR2 321 aa9.51□□□□□ -0.89
SSBP2-214ENST00000510060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.51□□□□□ -0.89
SSBP2-214ENST00000510060 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
SSBP2-214ENST00000510060 CPNE3O75131 537 aaKnown RBP9.5□□□□□ -0.89
SSBP2-214ENST00000510060 ARL4DP49703 201 aa9.5□□□□□ -0.89
SSBP2-214ENST00000510060 AKTIPQ9H8T0 292 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms