RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
MBD4-208ENST00000509828 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
MBD4-208ENST00000509828 SASH1O94885 1247 aa13.33□□□□□ -0.28
MBD4-208ENST00000509828 ALDH1A1P00352 501 aa13.33□□□□□ -0.28
MBD4-208ENST00000509828 KCNJ4P48050 445 aa13.33□□□□□ -0.28
MBD4-208ENST00000509828 PTPN12Q05209 780 aaKnown RBP13.33□□□□□ -0.28
MBD4-208ENST00000509828 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
MBD4-208ENST00000509828 APOBEC3FQ8IUX4 373 aaKnown RBP13.33□□□□□ -0.28
MBD4-208ENST00000509828 METTL22Q9BUU2 404 aaPredicted RBP13.33□□□□□ -0.28
MBD4-208ENST00000509828 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
MBD4-208ENST00000509828 ANGEL1Q9UNK9 670 aaKnown RBP13.33□□□□□ -0.28
MBD4-208ENST00000509828 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.28
MBD4-208ENST00000509828 WNT10BO00744 389 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
MBD4-208ENST00000509828 IGHMBP2P38935 993 aaKnown RBP13.32□□□□□ -0.28
MBD4-208ENST00000509828 CCT4P50991 539 aaKnown RBP13.32□□□□□ -0.28
MBD4-208ENST00000509828 CTSWP56202 376 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 GNAI1P63096 354 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 DACT2Q5SW24 774 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 BSDC1Q9NW68 430 aaPredicted RBP13.32□□□□□ -0.28
MBD4-208ENST00000509828 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 ADAMTS8Q9UP79 889 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 MYBBP1AQ9BQG0 1328 aaKnown RBP13.32□□□□□ -0.28
MBD4-208ENST00000509828 PAPPA2Q9BXP8 1791 aa13.32□□□□□ -0.28
MBD4-208ENST00000509828 MMP14P50281 582 aa13.31□□□□□ -0.28
MBD4-208ENST00000509828 INHBEP58166 350 aa13.31□□□□□ -0.28
MBD4-208ENST00000509828 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
MBD4-208ENST00000509828 KIAA0825Q8IV33 1275 aa13.31□□□□□ -0.28
MBD4-208ENST00000509828 MAP3K2Q9Y2U5 619 aa13.31□□□□□ -0.28
MBD4-208ENST00000509828 TRIM17Q9Y577 477 aa13.31□□□□□ -0.28
MBD4-208ENST00000509828 MED23Q9ULK4 1368 aa13.31□□□□□ -0.28
MBD4-208ENST00000509828 MANSC4A6NHS7 340 aaPredicted RBP13.3□□□□□ -0.28
MBD4-208ENST00000509828 WTIPA6NIX2 430 aaPredicted RBP13.3□□□□□ -0.28
MBD4-208ENST00000509828 PPP1R12BO60237 982 aaPredicted RBP13.3□□□□□ -0.28
MBD4-208ENST00000509828 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 SPRYD7Q5W111 196 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 MPHOSPH8Q99549 860 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 GREM2Q9H772 168 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 ZNF609O15014 1411 aa13.3□□□□□ -0.28
MBD4-208ENST00000509828 COL4A1P02462 1669 aa13.29□□□□□ -0.28
MBD4-208ENST00000509828 MYO1BO43795 1136 aa13.29□□□□□ -0.28
MBD4-208ENST00000509828 GTF2IP78347 998 aa13.29□□□□□ -0.28
MBD4-208ENST00000509828 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
MBD4-208ENST00000509828 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
MBD4-208ENST00000509828 STK31Q9BXU1 1019 aa13.29□□□□□ -0.28
MBD4-208ENST00000509828 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
MBD4-208ENST00000509828 DDX10Q13206 875 aaKnown RBP13.28□□□□□ -0.28
MBD4-208ENST00000509828 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 KSR2Q6VAB6 950 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 DEFB129Q9H1M3 183 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 R3HDMLQ9H3Y0 253 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
MBD4-208ENST00000509828 PI4KAP2A4QPH2 592 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 APAF1O14727 1248 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.29
MBD4-208ENST00000509828 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 PI4KAP1Q8N8J0 262 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 FZD1Q9UP38 647 aa13.27□□□□□ -0.29
MBD4-208ENST00000509828 F8W031 263 aaPredicted RBP13.26□□□□□ -0.29
MBD4-208ENST00000509828 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
MBD4-208ENST00000509828 UBE3BQ7Z3V4 1068 aa13.26□□□□□ -0.29
MBD4-208ENST00000509828 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
MBD4-208ENST00000509828 TMEM106CQ9BVX2 250 aa13.26□□□□□ -0.29
MBD4-208ENST00000509828 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
MBD4-208ENST00000509828 ZBTB48P10074 688 aaPredicted RBP13.25□□□□□ -0.29
MBD4-208ENST00000509828 ITGA6P23229 1130 aa13.25□□□□□ -0.29
MBD4-208ENST00000509828 IREB2P48200 963 aaKnown RBP13.25□□□□□ -0.29
MBD4-208ENST00000509828 ARHGEF6Q15052 776 aa13.25□□□□□ -0.29
MBD4-208ENST00000509828 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
MBD4-208ENST00000509828 HABP4Q5JVS0 413 aaKnown RBP13.25□□□□□ -0.29
MBD4-208ENST00000509828 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
MBD4-208ENST00000509828 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
MBD4-208ENST00000509828 EFCC1Q9HA90 598 aa13.25□□□□□ -0.29
MBD4-208ENST00000509828 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
MBD4-208ENST00000509828 IGKV5-2P06315 115 aa13.24□□□□□ -0.29
MBD4-208ENST00000509828 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
MBD4-208ENST00000509828 CLMNQ96JQ2 1002 aa13.24□□□□□ -0.29
MBD4-208ENST00000509828 CHMP3Q9Y3E7 222 aa13.24□□□□□ -0.29
MBD4-208ENST00000509828 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
MBD4-208ENST00000509828 ANKRD18BA2A2Z9 1011 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 KLRK1P26718 216 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 CFAP100Q494V2 611 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 ZNF804AQ7Z570 1209 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 CD209Q9NNX6 404 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 PTPN22Q9Y2R2 807 aa13.23□□□□□ -0.29
MBD4-208ENST00000509828 H7C1W4 665 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms