RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PBX4Q9BYU1 374 aa9.59□□□□□ -0.87
TRAPPC13-209ENST00000508304 ABI2Q9NYB9 513 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC13-209ENST00000508304 EPHA1P21709 976 aa9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 CDC25BP30305 580 aa9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 NAA30Q147X3 362 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 DUOXA2Q1HG44 320 aa9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 RNF43Q68DV7 783 aa9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 TRIM42Q8IWZ5 723 aa9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 GPR152Q8TDT2 470 aa9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC13-209ENST00000508304 ADAM11O75078 769 aa9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 CYP2E1P05181 493 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 FAM117BQ6P1L5 589 aa9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 DBNDD2Q9BQY9 259 aa9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 ADAM19Q9H013 955 aa9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 SH2B1Q9NRF2 756 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 STIM2Q9P246 746 aa9.57□□□□□ -0.88
TRAPPC13-209ENST00000508304 HMX2A2RU54 273 aa9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 PRR19A6NJB7 356 aa9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 ZBTB39O15060 712 aa9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 DDX3YO15523 660 aaKnown RBP9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 ADAMTS4O75173 837 aa9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 TXKP42681 527 aa9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 INTS5Q6P9B9 1019 aaKnown RBP9.56□□□□□ -0.88
TRAPPC13-209ENST00000508304 TAL1P17542 331 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 PTPRAP18433 802 aa9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 GRIK1P39086 918 aa9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 SRPK2P78362 688 aaKnown RBP9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 NCAPG2Q86XI2 1143 aa9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 UBASH3BQ8TF42 649 aa9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 KLHDC7BQ96G42 594 aa9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 POP1Q99575 1024 aaKnown RBP9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 SEC31BQ9NQW1 1179 aa9.55□□□□□ -0.88
TRAPPC13-209ENST00000508304 DTX1Q86Y01 620 aa9.54□□□□□ -0.88
TRAPPC13-209ENST00000508304 CLEC10AQ8IUN9 316 aa9.54□□□□□ -0.88
TRAPPC13-209ENST00000508304 FAM20CQ8IXL6 584 aa9.54□□□□□ -0.88
TRAPPC13-209ENST00000508304 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
TRAPPC13-209ENST00000508304 PDE12Q6L8Q7 609 aaKnown RBP9.53□□□□□ -0.88
TRAPPC13-209ENST00000508304 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-209ENST00000508304 WNT8BQ93098 351 aa9.53□□□□□ -0.88
TRAPPC13-209ENST00000508304 FAM83CQ9BQN1 747 aa9.53□□□□□ -0.88
TRAPPC13-209ENST00000508304 ELP3Q9H9T3 547 aa9.53□□□□□ -0.88
TRAPPC13-209ENST00000508304 TMEM63CQ9P1W3 806 aa9.53□□□□□ -0.88
TRAPPC13-209ENST00000508304 KRTAP4-8A0A0G2JLE6 195 aa9.52□□□□□ -0.89
TRAPPC13-209ENST00000508304 H3BRJ5 948 aa9.52□□□□□ -0.89
TRAPPC13-209ENST00000508304 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
TRAPPC13-209ENST00000508304 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
TRAPPC13-209ENST00000508304 ATG7O95352 703 aa9.51□□□□□ -0.89
TRAPPC13-209ENST00000508304 ANKRD34AQ69YU3 496 aa9.51□□□□□ -0.89
TRAPPC13-209ENST00000508304 CLP1Q92989 425 aaKnown RBP9.51□□□□□ -0.89
TRAPPC13-209ENST00000508304 OSGEPQ9NPF4 335 aa9.51□□□□□ -0.89
TRAPPC13-209ENST00000508304 SALL4Q9UJQ4 1053 aa9.51□□□□□ -0.89
TRAPPC13-209ENST00000508304 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 NFKBIEO00221 500 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 BMP3P12645 472 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 PREPP48147 710 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 SHKBP1Q8TBC3 707 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 NUDT16Q96DE0 195 aaKnown RBP9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 RNF208Q9H0X6 261 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 CNTN3Q9P232 1028 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 KANSL3Q9P2N6 904 aa9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC13-209ENST00000508304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC13-209ENST00000508304 BEND4Q6ZU67 534 aa9.49□□□□□ -0.89
TRAPPC13-209ENST00000508304 HIF3AQ9Y2N7 669 aa9.49□□□□□ -0.89
TRAPPC13-209ENST00000508304 SART1O43290 800 aaKnown RBP9.48□□□□□ -0.89
TRAPPC13-209ENST00000508304 CABP4P57796 275 aa9.48□□□□□ -0.89
TRAPPC13-209ENST00000508304 ZNF438Q7Z4V0 828 aa9.48□□□□□ -0.89
TRAPPC13-209ENST00000508304 KCNF1Q9H3M0 494 aa9.48□□□□□ -0.89
TRAPPC13-209ENST00000508304 SLAIN2Q9P270 581 aa9.48□□□□□ -0.89
TRAPPC13-209ENST00000508304 WNT11O96014 354 aa9.47□□□□□ -0.89
TRAPPC13-209ENST00000508304 ACPPP15309 386 aa9.47□□□□□ -0.89
TRAPPC13-209ENST00000508304 XKR5Q6UX68 686 aa9.47□□□□□ -0.89
TRAPPC13-209ENST00000508304 DZANK1Q9NVP4 752 aa9.47□□□□□ -0.89
TRAPPC13-209ENST00000508304 NLRP12P59046 1061 aa9.46□□□□□ -0.9
TRAPPC13-209ENST00000508304 ATCAYQ86WG3 371 aa9.46□□□□□ -0.9
TRAPPC13-209ENST00000508304 RUSC1Q9BVN2 902 aa9.46□□□□□ -0.9
TRAPPC13-209ENST00000508304 RNF114Q9Y508 228 aa9.46□□□□□ -0.9
TRAPPC13-209ENST00000508304 MEGF11A6BM72 1044 aa9.45□□□□□ -0.9
TRAPPC13-209ENST00000508304 RPLP1P05386 114 aaKnown RBP9.45□□□□□ -0.9
TRAPPC13-209ENST00000508304 YBX3P16989 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRAPPC13-209ENST00000508304 C1orf127Q8N9H9 656 aa9.45□□□□□ -0.9
TRAPPC13-209ENST00000508304 SEPT3Q9UH03 358 aa9.45□□□□□ -0.9
TRAPPC13-209ENST00000508304 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
TRAPPC13-209ENST00000508304 PDE2AO00408 941 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC13-209ENST00000508304 CES1P23141 567 aa9.44□□□□□ -0.9
TRAPPC13-209ENST00000508304 FDX2Q6P4F2 183 aa9.44□□□□□ -0.9
TRAPPC13-209ENST00000508304 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
TRAPPC13-209ENST00000508304 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
TRAPPC13-209ENST00000508304 SLC7A3Q8WY07 619 aa9.43□□□□□ -0.9
TRAPPC13-209ENST00000508304 ADGRE2Q9UHX3 823 aa9.43□□□□□ -0.9
TRAPPC13-209ENST00000508304 TRPA1O75762 1119 aa9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 MAP4P27816 1152 aaKnown RBP9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 HGSNATQ68CP4 663 aa9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 TMEM102Q8N9M5 508 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 EDEM1Q92611 657 aa9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 MFSD14AQ96MC6 490 aa9.42□□□□□ -0.9
TRAPPC13-209ENST00000508304 CHRDQ9H2X0 955 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms