RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 HMGB2P26583 209 aaKnown RBP7.98□□□□□ -1.13
VEGFC-201ENST00000507638 MAP2K2P36507 400 aa7.98□□□□□ -1.13
VEGFC-201ENST00000507638 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
VEGFC-201ENST00000507638 ARHGEF25Q86VW2 580 aa7.98□□□□□ -1.13
VEGFC-201ENST00000507638 NLRP2Q9NX02 1062 aa7.98□□□□□ -1.13
VEGFC-201ENST00000507638 TBC1D2BQ9UPU7 963 aa7.98□□□□□ -1.13
VEGFC-201ENST00000507638 PCDHB9Q9Y5E1 797 aa7.98□□□□□ -1.13
VEGFC-201ENST00000507638 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
VEGFC-201ENST00000507638 NSD2O96028 1365 aa7.97□□□□□ -1.13
VEGFC-201ENST00000507638 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
VEGFC-201ENST00000507638 KDM6AO15550 1401 aaPredicted RBP7.97□□□□□ -1.13
VEGFC-201ENST00000507638 DDNO94850 711 aaPredicted RBP7.97□□□□□ -1.13
VEGFC-201ENST00000507638 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
VEGFC-201ENST00000507638 COL25A1Q9BXS0 654 aaPredicted RBP7.97□□□□□ -1.13
VEGFC-201ENST00000507638 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
VEGFC-201ENST00000507638 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
VEGFC-201ENST00000507638 UBR3Q6ZT12 1888 aa7.97□□□□□ -1.13
VEGFC-201ENST00000507638 MEGF6O75095 1541 aa7.97□□□□□ -1.13
VEGFC-201ENST00000507638 POLR3AO14802 1390 aaPredicted RBP7.97□□□□□ -1.13
VEGFC-201ENST00000507638 COL6A3P12111 3177 aa7.96□□□□□ -1.13
VEGFC-201ENST00000507638 GPR37L1O60883 481 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 ZIC2O95409 532 aaPredicted RBP7.96□□□□□ -1.14
VEGFC-201ENST00000507638 TIMP2P16035 220 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 SSFA2P28290 1259 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 CHRNA5P30532 468 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 NEUROD1Q13562 356 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 SCARF1Q14162 830 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 EAPPQ56P03 285 aaPredicted RBP7.96□□□□□ -1.14
VEGFC-201ENST00000507638 CNTROBQ8N137 903 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 GDPD2Q9HCC8 539 aa7.96□□□□□ -1.14
VEGFC-201ENST00000507638 NR3C2P08235 984 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 ABL2P42684 1182 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 TMF1P82094 1093 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 INTS6LQ5JSJ4 861 aaKnown RBP7.95□□□□□ -1.14
VEGFC-201ENST00000507638 PPP1R26Q5T8A7 1209 aaPredicted RBP7.95□□□□□ -1.14
VEGFC-201ENST00000507638 NLGN1Q8N2Q7 840 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 TAF1DQ9H5J8 278 aaPredicted RBP7.95□□□□□ -1.14
VEGFC-201ENST00000507638 ATP13A2Q9NQ11 1180 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 C4BP0C0L5 1744 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 TOGARAM1Q9Y4F4 1720 aa7.95□□□□□ -1.14
VEGFC-201ENST00000507638 THSD7BQ9C0I4 1608 aa7.94□□□□□ -1.14
VEGFC-201ENST00000507638 ST8SIA5O15466 376 aa7.94□□□□□ -1.14
VEGFC-201ENST00000507638 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
VEGFC-201ENST00000507638 TSEN34Q9BSV6 310 aaKnown RBP7.94□□□□□ -1.14
VEGFC-201ENST00000507638 COG6Q9Y2V7 657 aa7.94□□□□□ -1.14
VEGFC-201ENST00000507638 PARP3Q9Y6F1 533 aa7.94□□□□□ -1.14
VEGFC-201ENST00000507638 PIK3C2GO75747 1445 aa7.94□□□□□ -1.14
VEGFC-201ENST00000507638 DOT1LQ8TEK3 1739 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 FMR1Q06787 632 aaKnown RBP eCLIP7.93□□□□□ -1.14
VEGFC-201ENST00000507638 IRF5Q13568 498 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 CIAPIN1Q6FI81 312 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 MEIOBQ8N635 442 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 CDK19Q9BWU1 502 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 PRDM6Q9NQX0 595 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 DDX21Q9NR30 783 aaKnown RBP eCLIP7.93□□□□□ -1.14
VEGFC-201ENST00000507638 TRIOBPQ9H2D6 2365 aa7.93□□□□□ -1.14
VEGFC-201ENST00000507638 CPSF1Q10570 1443 aaKnown RBP7.93□□□□□ -1.14
VEGFC-201ENST00000507638 IQCA1LA6NCM1 817 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 LCE2BO14633 110 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 NBPF1Q3BBV0 1214 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 MRPL14Q6P1L8 145 aaKnown RBP7.92□□□□□ -1.14
VEGFC-201ENST00000507638 Q6ZVU0 165 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 ITPKCQ96DU7 683 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 TRIM47Q96LD4 638 aa7.92□□□□□ -1.14
VEGFC-201ENST00000507638 NFKBIEO00221 500 aa7.91□□□□□ -1.14
VEGFC-201ENST00000507638 NSD3Q9BZ95 1437 aa7.91□□□□□ -1.14
VEGFC-201ENST00000507638 SLIT3O75094 1523 aa7.91□□□□□ -1.14
VEGFC-201ENST00000507638 DICER1Q9UPY3 1922 aaKnown RBP7.91□□□□□ -1.14
VEGFC-201ENST00000507638 SCN4AP35499 1836 aa7.9□□□□□ -1.14
VEGFC-201ENST00000507638 PALLDQ8WX93 1383 aa7.9□□□□□ -1.14
VEGFC-201ENST00000507638 A6NJR5 290 aa7.9□□□□□ -1.14
VEGFC-201ENST00000507638 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
VEGFC-201ENST00000507638 CTU1Q7Z7A3 348 aaKnown RBP7.9□□□□□ -1.14
VEGFC-201ENST00000507638 KCNH5Q8NCM2 988 aa7.9□□□□□ -1.14
VEGFC-201ENST00000507638 CEP126Q9P2H0 1117 aa7.9□□□□□ -1.14
VEGFC-201ENST00000507638 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
VEGFC-201ENST00000507638 ERVH48-1M5A8F1 160 aa7.89□□□□□ -1.15
VEGFC-201ENST00000507638 LZTS3O60299 673 aaPredicted RBP7.89□□□□□ -1.15
VEGFC-201ENST00000507638 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
VEGFC-201ENST00000507638 TRAPPC3LQ5T215 181 aa7.89□□□□□ -1.15
VEGFC-201ENST00000507638 CST9Q5W186 159 aa7.89□□□□□ -1.15
VEGFC-201ENST00000507638 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
VEGFC-201ENST00000507638 MPRIPQ6WCQ1 1025 aa7.88□□□□□ -1.15
VEGFC-201ENST00000507638 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
VEGFC-201ENST00000507638 NFATC2IPQ8NCF5 419 aa7.88□□□□□ -1.15
VEGFC-201ENST00000507638 ZIC5Q96T25 663 aa7.88□□□□□ -1.15
VEGFC-201ENST00000507638 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
VEGFC-201ENST00000507638 MKI67P46013 3256 aaKnown RBP7.88□□□□□ -1.15
VEGFC-201ENST00000507638 ROCK1Q13464 1354 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 MYCP01106 439 aaPredicted RBP7.87□□□□□ -1.15
VEGFC-201ENST00000507638 GYS1P13807 737 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 EPHX2P34913 555 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 VAC14Q08AM6 782 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 CC2D2BQ6DHV5 1058 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 ERICH6Q7L0X2 663 aa7.87□□□□□ -1.15
VEGFC-201ENST00000507638 ZCRB1Q8TBF4 217 aaKnown RBP7.87□□□□□ -1.15
VEGFC-201ENST00000507638 ANKRD24Q8TF21 1146 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms