RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZBTB48P10074 688 aaPredicted RBP9.62□□□□□ -0.87
VCAN-207ENST00000507162 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 CELF1Q92879 486 aaKnown RBP9.62□□□□□ -0.87
VCAN-207ENST00000507162 PTPN18Q99952 460 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 THUMPD2Q9BTF0 503 aaKnown RBP9.62□□□□□ -0.87
VCAN-207ENST00000507162 ANKIB1Q9P2G1 1089 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 RAPGEFL1Q9UHV5 662 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 USP17L3A6NCW0 530 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 USP17L4A6NCW7 530 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 UFL1O94874 794 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 KIF22Q14807 665 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 TAF7Q15545 349 aaPredicted RBP9.61□□□□□ -0.87
VCAN-207ENST00000507162 USP17L1Q7RTZ2 530 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 FBXW7Q969H0 707 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 GMLQ99445 158 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 ARHGAP39Q9C0H5 1083 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 ZFYVE28Q9HCC9 887 aa9.61□□□□□ -0.87
VCAN-207ENST00000507162 BIN2Q9UBW5 565 aaPredicted RBP9.61□□□□□ -0.87
VCAN-207ENST00000507162 WNT10BO00744 389 aa9.6□□□□□ -0.87
VCAN-207ENST00000507162 PPP1R12BO60237 982 aaPredicted RBP9.6□□□□□ -0.87
VCAN-207ENST00000507162 SASH1O94885 1247 aa9.6□□□□□ -0.87
VCAN-207ENST00000507162 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
VCAN-207ENST00000507162 CNGB1Q14028 1251 aaPredicted RBP9.6□□□□□ -0.87
VCAN-207ENST00000507162 TAF1CQ15572 869 aaPredicted RBP9.6□□□□□ -0.87
VCAN-207ENST00000507162 MXD3Q9BW11 206 aa9.6□□□□□ -0.87
VCAN-207ENST00000507162 RNF208Q9H0X6 261 aa9.6□□□□□ -0.87
VCAN-207ENST00000507162 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 FARP2O94887 1054 aaPredicted RBP9.59□□□□□ -0.87
VCAN-207ENST00000507162 GJA5P36382 358 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 GJA8P48165 433 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 BCAMP50895 628 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 RPS8P62241 208 aaKnown RBP9.59□□□□□ -0.87
VCAN-207ENST00000507162 EVX2Q03828 476 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 NLRP10Q86W26 655 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 GGA1Q9UJY5 639 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 TAF1P21675 1872 aa9.59□□□□□ -0.87
VCAN-207ENST00000507162 GJB1P08034 283 aa9.58□□□□□ -0.88
VCAN-207ENST00000507162 CCL5P13501 91 aa9.58□□□□□ -0.88
VCAN-207ENST00000507162 AIMP1Q12904 312 aaKnown RBP9.58□□□□□ -0.88
VCAN-207ENST00000507162 UBE2Q1Q7Z7E8 422 aa9.58□□□□□ -0.88
VCAN-207ENST00000507162 APOBEC3FQ8IUX4 373 aaKnown RBP9.58□□□□□ -0.88
VCAN-207ENST00000507162 FAM122AQ96E09 287 aa9.58□□□□□ -0.88
VCAN-207ENST00000507162 DUOX1Q9NRD9 1551 aa9.58□□□□□ -0.88
VCAN-207ENST00000507162 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
VCAN-207ENST00000507162 SCN9AQ15858 1988 aa9.57□□□□□ -0.88
VCAN-207ENST00000507162 ANXA1P04083 346 aa9.57□□□□□ -0.88
VCAN-207ENST00000507162 EIF2S2P20042 333 aaKnown RBP9.57□□□□□ -0.88
VCAN-207ENST00000507162 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
VCAN-207ENST00000507162 RTL5Q5HYW3 569 aaPredicted RBP9.57□□□□□ -0.88
VCAN-207ENST00000507162 FAM161BQ96MY7 647 aa9.57□□□□□ -0.88
VCAN-207ENST00000507162 DEFB129Q9H1M3 183 aa9.57□□□□□ -0.88
VCAN-207ENST00000507162 ZMYND8Q9ULU4 1186 aaPredicted RBP9.57□□□□□ -0.88
VCAN-207ENST00000507162 RPTORQ8N122 1335 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 TESPA1A2RU30 521 aaPredicted RBP9.56□□□□□ -0.88
VCAN-207ENST00000507162 WDHD1O75717 1129 aaPredicted RBP9.56□□□□□ -0.88
VCAN-207ENST00000507162 TFRCP02786 760 aaKnown RBP9.56□□□□□ -0.88
VCAN-207ENST00000507162 GRK4P32298 578 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 BMP8BP34820 402 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 IREB2P48200 963 aaKnown RBP9.56□□□□□ -0.88
VCAN-207ENST00000507162 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
VCAN-207ENST00000507162 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 LRIT3Q3SXY7 679 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 HSP90AB3PQ58FF7 597 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 CC2D1BQ5T0F9 858 aaKnown RBP9.56□□□□□ -0.88
VCAN-207ENST00000507162 PODNQ7Z5L7 613 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 RAET1EQ8TD07 263 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 FAM89AQ96GI7 184 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 GDF15Q99988 308 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 ELP3Q9H9T3 547 aa9.56□□□□□ -0.88
VCAN-207ENST00000507162 CCL15-CCL14A0A0B4J2E2 113 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
VCAN-207ENST00000507162 HOXD10P28358 340 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 PRMT2P55345 433 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
VCAN-207ENST00000507162 LACTBP83111 547 aaPredicted RBP9.55□□□□□ -0.88
VCAN-207ENST00000507162 CCL15Q16663 113 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 SUPT20HL1Q3ZLR7 823 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
VCAN-207ENST00000507162 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 U2AF1L4Q8WU68 220 aaKnown RBP9.55□□□□□ -0.88
VCAN-207ENST00000507162 BRI3BPQ8WY22 251 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 OPTNQ96CV9 577 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 TRIM47Q96LD4 638 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 RIPOR2Q9Y4F9 1068 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 IRS2Q9Y4H2 1338 aa9.55□□□□□ -0.88
VCAN-207ENST00000507162 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
VCAN-207ENST00000507162 GNRH1P01148 92 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 SYN1P17600 705 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 PLA2G5P39877 138 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 PSMC4P43686 418 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 UBXN2AP68543 259 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 PROSER3Q2NL68 480 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms