RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 FUT2Q10981 343 aa8.67□□□□□ -1.02
NEDD4-206ENST00000507063 HLFQ16534 295 aa8.67□□□□□ -1.02
NEDD4-206ENST00000507063 TEX13AQ9BXU3 409 aaPredicted RBP8.67□□□□□ -1.02
NEDD4-206ENST00000507063 SLX4Q8IY92 1834 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 TNRC6CQ9HCJ0 1690 aaKnown RBP8.66□□□□□ -1.02
NEDD4-206ENST00000507063 DDNO94850 711 aaPredicted RBP8.66□□□□□ -1.02
NEDD4-206ENST00000507063 SRGNP10124 158 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 MDM2Q00987 491 aaPredicted RBP8.66□□□□□ -1.02
NEDD4-206ENST00000507063 ERFEQ4G0M1 354 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
NEDD4-206ENST00000507063 NGEFQ8N5V2 710 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 CNBD1Q8NA66 436 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 SMC1BQ8NDV3 1235 aa8.66□□□□□ -1.02
NEDD4-206ENST00000507063 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
NEDD4-206ENST00000507063 NPHP1O15259 732 aa8.65□□□□□ -1.02
NEDD4-206ENST00000507063 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.02
NEDD4-206ENST00000507063 C7orf43Q8WVR3 580 aa8.65□□□□□ -1.02
NEDD4-206ENST00000507063 THAP11Q96EK4 314 aa8.65□□□□□ -1.02
NEDD4-206ENST00000507063 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
NEDD4-206ENST00000507063 THUMPD2Q9BTF0 503 aaKnown RBP8.65□□□□□ -1.02
NEDD4-206ENST00000507063 CACNA1SQ13698 1873 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 FER1L6Q2WGJ9 1857 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 ZC3H4Q9UPT8 1303 aaKnown RBP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 GCGRP47871 477 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 ST5P78524 1137 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 Q3C1V9 767 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 NBPF5PQ86XG9 351 aaPredicted RBP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 ZNF277Q9NRM2 450 aaPredicted RBP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 GMPR2Q9P2T1 348 aaKnown RBP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 NIP7Q9Y221 180 aaKnown RBP eCLIP8.64□□□□□ -1.03
NEDD4-206ENST00000507063 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
NEDD4-206ENST00000507063 BCORQ6W2J9 1755 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 TAF7Q15545 349 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-206ENST00000507063 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-206ENST00000507063 STYK1Q6J9G0 422 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 TTLL7Q6ZT98 887 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 NPM2Q86SE8 214 aaKnown RBP8.63□□□□□ -1.03
NEDD4-206ENST00000507063 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-206ENST00000507063 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 SENP2Q9HC62 589 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 STK17AQ9UEE5 414 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 NUDCQ9Y266 331 aa8.63□□□□□ -1.03
NEDD4-206ENST00000507063 KLRG2A4D1S0 409 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-206ENST00000507063 WNT7AO00755 349 aa8.62□□□□□ -1.03
NEDD4-206ENST00000507063 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
NEDD4-206ENST00000507063 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
NEDD4-206ENST00000507063 CLEC4GQ6UXB4 293 aa8.62□□□□□ -1.03
NEDD4-206ENST00000507063 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
NEDD4-206ENST00000507063 PLEKHF1Q96S99 279 aa8.62□□□□□ -1.03
NEDD4-206ENST00000507063 RRP7AQ9Y3A4 280 aaKnown RBP8.62□□□□□ -1.03
NEDD4-206ENST00000507063 ZNF541Q9H0D2 1346 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 LTBP3Q9NS15 1303 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 TCERG1O14776 1098 aaKnown RBP8.61□□□□□ -1.03
NEDD4-206ENST00000507063 HSPA1AP0DMV8 641 aaKnown RBP8.61□□□□□ -1.03
NEDD4-206ENST00000507063 HSPA1BP0DMV9 641 aaKnown RBP8.61□□□□□ -1.03
NEDD4-206ENST00000507063 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
NEDD4-206ENST00000507063 MYL6BP14649 208 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 NPR1P16066 1061 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 GPTP24298 496 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 EIF4A1P60842 406 aaKnown RBP8.61□□□□□ -1.03
NEDD4-206ENST00000507063 MKRN1Q9UHC7 482 aaKnown RBP8.61□□□□□ -1.03
NEDD4-206ENST00000507063 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 ABCC12Q96J65 1359 aa8.61□□□□□ -1.03
NEDD4-206ENST00000507063 DICER1Q9UPY3 1922 aaKnown RBP8.6□□□□□ -1.03
NEDD4-206ENST00000507063 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
NEDD4-206ENST00000507063 CD46P15529 392 aa8.6□□□□□ -1.03
NEDD4-206ENST00000507063 TPTE2Q6XPS3 522 aa8.6□□□□□ -1.03
NEDD4-206ENST00000507063 SYNE4Q8N205 404 aa8.6□□□□□ -1.03
NEDD4-206ENST00000507063 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
NEDD4-206ENST00000507063 ZNF428Q96B54 188 aa8.6□□□□□ -1.03
NEDD4-206ENST00000507063 ZBTB3Q9H5J0 574 aa8.6□□□□□ -1.03
NEDD4-206ENST00000507063 ZNF652Q9Y2D9 606 aa8.6□□□□□ -1.03
NEDD4-206ENST00000507063 COL4A5P29400 1685 aa8.59□□□□□ -1.03
NEDD4-206ENST00000507063 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
NEDD4-206ENST00000507063 ANXA1P04083 346 aa8.59□□□□□ -1.03
NEDD4-206ENST00000507063 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-206ENST00000507063 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEDD4-206ENST00000507063 FMR1Q06787 632 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEDD4-206ENST00000507063 CCDC93Q567U6 631 aa8.59□□□□□ -1.03
NEDD4-206ENST00000507063 EAPPQ56P03 285 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-206ENST00000507063 SUSD4Q5VX71 490 aa8.59□□□□□ -1.03
NEDD4-206ENST00000507063 TAF1DQ9H5J8 278 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-206ENST00000507063 FAM217BQ9NTX9 383 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-206ENST00000507063 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 ARFGEF2Q9Y6D5 1785 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 RNF123Q5XPI4 1314 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 TRIM32Q13049 653 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 NFE2L2Q16236 605 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
NEDD4-206ENST00000507063 PRDM9Q9NQV7 894 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms