RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 SCAF8Q9UPN6 1271 aaKnown RBP20.78■□□□□ 0.92
SNX2-205ENST00000506874 SALL2Q9Y467 1007 aaPredicted RBP20.78■□□□□ 0.92
SNX2-205ENST00000506874 H7C1W4 665 aa20.77■□□□□ 0.92
SNX2-205ENST00000506874 CCT4P50991 539 aaKnown RBP20.77■□□□□ 0.92
SNX2-205ENST00000506874 MXD3Q9BW11 206 aa20.77■□□□□ 0.92
SNX2-205ENST00000506874 MCOLN1Q9GZU1 580 aa20.77■□□□□ 0.92
SNX2-205ENST00000506874 MED23Q9ULK4 1368 aa20.76■□□□□ 0.91
SNX2-205ENST00000506874 IGHMBP2P38935 993 aaKnown RBP20.76■□□□□ 0.91
SNX2-205ENST00000506874 ZNF609O15014 1411 aa20.76■□□□□ 0.91
SNX2-205ENST00000506874 FLIIQ13045 1269 aa20.75■□□□□ 0.91
SNX2-205ENST00000506874 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
SNX2-205ENST00000506874 DGKZQ13574 1117 aa20.75■□□□□ 0.91
SNX2-205ENST00000506874 GCKRQ14397 625 aa20.75■□□□□ 0.91
SNX2-205ENST00000506874 FAM161AQ3B820 660 aa20.75■□□□□ 0.91
SNX2-205ENST00000506874 AKAP11Q9UKA4 1901 aa20.74■□□□□ 0.91
SNX2-205ENST00000506874 IL16Q14005 1332 aa20.74■□□□□ 0.91
SNX2-205ENST00000506874 TRPA1O75762 1119 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 SLC10A3P09131 477 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 ITGA6P23229 1130 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 NBPF9Q3BBW0 867 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 DACT2Q5SW24 774 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 PRAMEF18Q5VWM3 479 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 TXNRD3Q86VQ6 643 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 DNAAF4Q8WXU2 420 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 FANCIQ9NVI1 1328 aa20.73■□□□□ 0.91
SNX2-205ENST00000506874 MPHOSPH8Q99549 860 aa20.72■□□□□ 0.91
SNX2-205ENST00000506874 PLA2G12BQ9BX93 195 aa20.72■□□□□ 0.91
SNX2-205ENST00000506874 COA1Q9GZY4 146 aa20.72■□□□□ 0.91
SNX2-205ENST00000506874 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
SNX2-205ENST00000506874 LEMD3Q9Y2U8 911 aa20.72■□□□□ 0.91
SNX2-205ENST00000506874 CACNA1FO60840 1977 aa20.72■□□□□ 0.91
SNX2-205ENST00000506874 KLRK1P26718 216 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 CASP7P55210 303 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 MOB2Q70IA6 237 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 RNF186Q9NXI6 227 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 PITPNM2Q9BZ72 1349 aa20.71■□□□□ 0.91
SNX2-205ENST00000506874 KCNJ4P48050 445 aa20.7■□□□□ 0.9
SNX2-205ENST00000506874 STRIP1Q5VSL9 837 aa20.7■□□□□ 0.9
SNX2-205ENST00000506874 RASAL3Q86YV0 1011 aa20.7■□□□□ 0.9
SNX2-205ENST00000506874 CSRNP1Q96S65 589 aa20.7■□□□□ 0.9
SNX2-205ENST00000506874 ANKRD2Q9GZV1 360 aa20.7■□□□□ 0.9
SNX2-205ENST00000506874 ZNF646O15015 1829 aaPredicted RBP20.69■□□□□ 0.9
SNX2-205ENST00000506874 UBE2Q2LH0YL09 131 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 VAMP4O75379 141 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 SASH1O94885 1247 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 EXOSC9Q06265 439 aaKnown RBP20.69■□□□□ 0.9
SNX2-205ENST00000506874 TTLL12Q14166 644 aaPredicted RBP20.69■□□□□ 0.9
SNX2-205ENST00000506874 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
SNX2-205ENST00000506874 TTLL5Q6EMB2 1281 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 LINS1Q8NG48 757 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 SAGE1Q9NXZ1 904 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 PAPPA2Q9BXP8 1791 aa20.69■□□□□ 0.9
SNX2-205ENST00000506874 CSF1RP07333 972 aa20.68■□□□□ 0.9
SNX2-205ENST00000506874 FKBP1BP68106 108 aa20.68■□□□□ 0.9
SNX2-205ENST00000506874 CHRNDQ07001 517 aa20.68■□□□□ 0.9
SNX2-205ENST00000506874 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
SNX2-205ENST00000506874 MYO3BQ8WXR4 1341 aa20.68■□□□□ 0.9
SNX2-205ENST00000506874 ANKRD18BA2A2Z9 1011 aa20.67■□□□□ 0.9
SNX2-205ENST00000506874 F6X3S4 739 aa20.67■□□□□ 0.9
SNX2-205ENST00000506874 WNT10BO00744 389 aa20.67■□□□□ 0.9
SNX2-205ENST00000506874 GTF2IP78347 998 aa20.67■□□□□ 0.9
SNX2-205ENST00000506874 MLLT1Q03111 559 aaPredicted RBP20.67■□□□□ 0.9
SNX2-205ENST00000506874 KIAA0825Q8IV33 1275 aa20.67■□□□□ 0.9
SNX2-205ENST00000506874 SNAP23O00161 211 aa20.66■□□□□ 0.9
SNX2-205ENST00000506874 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
SNX2-205ENST00000506874 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
SNX2-205ENST00000506874 HELBQ8NG08 1087 aaPredicted RBP20.66■□□□□ 0.9
SNX2-205ENST00000506874 CCER2I3L3R5 266 aa20.65■□□□□ 0.9
SNX2-205ENST00000506874 TAF5LO75529 589 aa20.65■□□□□ 0.9
SNX2-205ENST00000506874 HDAC9Q9UKV0 1011 aa20.65■□□□□ 0.9
SNX2-205ENST00000506874 NF2P35240 595 aa20.64■□□□□ 0.89
SNX2-205ENST00000506874 IFIT5Q13325 482 aaKnown RBP20.64■□□□□ 0.89
SNX2-205ENST00000506874 PRKG1Q13976 671 aa20.64■□□□□ 0.89
SNX2-205ENST00000506874 CD209Q9NNX6 404 aa20.64■□□□□ 0.89
SNX2-205ENST00000506874 RGS19P49795 217 aa20.63■□□□□ 0.89
SNX2-205ENST00000506874 FOXO4P98177 505 aa20.63■□□□□ 0.89
SNX2-205ENST00000506874 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
SNX2-205ENST00000506874 REM2Q8IYK8 340 aaPredicted RBP20.63■□□□□ 0.89
SNX2-205ENST00000506874 SPINK5Q9NQ38 1064 aaPredicted RBP20.63■□□□□ 0.89
SNX2-205ENST00000506874 BEND3Q5T5X7 828 aa20.62■□□□□ 0.89
SNX2-205ENST00000506874 PLIN1O60240 522 aa20.61■□□□□ 0.89
SNX2-205ENST00000506874 LMBR1LQ6UX01 489 aa20.61■□□□□ 0.89
SNX2-205ENST00000506874 APOBEC3FQ8IUX4 373 aaKnown RBP20.61■□□□□ 0.89
SNX2-205ENST00000506874 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
SNX2-205ENST00000506874 F8W031 263 aaPredicted RBP20.6■□□□□ 0.89
SNX2-205ENST00000506874 MMP14P50281 582 aa20.6■□□□□ 0.89
SNX2-205ENST00000506874 EPHA10Q5JZY3 1008 aa20.6■□□□□ 0.89
SNX2-205ENST00000506874 MIER1Q8N108 512 aa20.6■□□□□ 0.89
SNX2-205ENST00000506874 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.6■□□□□ 0.89
SNX2-205ENST00000506874 JAG2Q9Y219 1238 aa20.6■□□□□ 0.89
SNX2-205ENST00000506874 A0A1B0GUL6 1792 aa20.59■□□□□ 0.89
SNX2-205ENST00000506874 DLGAP5Q15398 846 aa20.59■□□□□ 0.89
SNX2-205ENST00000506874 TAF7LQ5H9L4 462 aa20.59■□□□□ 0.89
SNX2-205ENST00000506874 ARMC9Q7Z3E5 817 aa20.59■□□□□ 0.89
SNX2-205ENST00000506874 CERS5Q8N5B7 392 aa20.59■□□□□ 0.89
SNX2-205ENST00000506874 ZBED3Q96IU2 234 aaPredicted RBP20.59■□□□□ 0.89
SNX2-205ENST00000506874 IRS2Q9Y4H2 1338 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms