RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 PRPF38BQ5VTL8 546 aaKnown RBP7.4□□□□□ -1.22
SCLT1-207ENST00000506233 SPACA7Q96KW9 195 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 BMP2KQ9NSY1 1161 aaPredicted RBP7.4□□□□□ -1.22
SCLT1-207ENST00000506233 CHPF2Q9P2E5 772 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 WDR17Q8IZU2 1322 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 CDK5RAP2Q96SN8 1893 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 BCL9O00512 1426 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 FAM196BA6NMK8 535 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 ANXA1P04083 346 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 MTX1Q13505 466 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 PSMD1Q99460 953 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 ZBTB3Q9H5J0 574 aa7.4□□□□□ -1.22
SCLT1-207ENST00000506233 CHRNA2Q15822 529 aa7.4□□□□□ -1.23
SCLT1-207ENST00000506233 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.23
SCLT1-207ENST00000506233 ARHGAP4P98171 946 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 SSH3Q8TE77 659 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 PTCD2Q8WV60 388 aaKnown RBP7.39□□□□□ -1.23
SCLT1-207ENST00000506233 SLC52A2Q9HAB3 445 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.39□□□□□ -1.23
SCLT1-207ENST00000506233 NRXN2Q9P2S2 1712 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 MAPK1P28482 360 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 GJA5P36382 358 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 PSME1Q06323 249 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 ITPRIPQ8IWB1 547 aa7.39□□□□□ -1.23
SCLT1-207ENST00000506233 PNNQ9H307 717 aaKnown RBP7.39□□□□□ -1.23
SCLT1-207ENST00000506233 HOXA2O43364 376 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 PARNO95453 639 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 HOXB7P09629 217 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 FBXO45P0C2W1 286 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 NCOA4Q13772 614 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 BMP2KLQ5H9B9 411 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 GAS2L2Q8NHY3 880 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 MKRN1Q9UHC7 482 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 LAS1LQ9Y4W2 734 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 USP16Q9Y5T5 823 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 DDX60LQ5H9U9 1706 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 PRMT3O60678 531 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 AMPHP49418 695 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 SLFNL1Q499Z3 407 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 TNS1Q9HBL0 1735 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 TCEAL1Q15170 157 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 LARP1Q6PKG0 1096 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
SCLT1-207ENST00000506233 STAP2Q9UGK3 403 aa7.38□□□□□ -1.23
SCLT1-207ENST00000506233 CHGBP05060 677 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 CLDN10P78369 228 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 AMIGO3Q86WK7 504 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 TSPYL4Q9UJ04 414 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 DLEC1Q9Y238 1755 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 BRCA2P51587 3418 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 LRRC37AA6NMS7 1700 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 TLDC2A0PJX2 215 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 P4HBP07237 508 aaKnown RBP7.37□□□□□ -1.23
SCLT1-207ENST00000506233 RGS3P49796 1198 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 SLC39A6Q13433 755 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 OCLNQ16625 522 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 C6orf132Q5T0Z8 1188 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 LTV1Q96GA3 475 aaPredicted RBP7.37□□□□□ -1.23
SCLT1-207ENST00000506233 ZNF496Q96IT1 587 aaPredicted RBP7.37□□□□□ -1.23
SCLT1-207ENST00000506233 EPAS1Q99814 870 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 RBM27Q9P2N5 1060 aaKnown RBP7.37□□□□□ -1.23
SCLT1-207ENST00000506233 FOXP2O15409 715 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 NKX2-3Q8TAU0 364 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 ZNF594Q96JF6 807 aaPredicted RBP7.37□□□□□ -1.23
SCLT1-207ENST00000506233 ASB16Q96NS5 453 aa7.37□□□□□ -1.23
SCLT1-207ENST00000506233 SASH1O94885 1247 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 SKIP12755 728 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 GTF2F1P35269 517 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCLT1-207ENST00000506233 LMOD3Q0VAK6 560 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 TTC22Q5TAA0 569 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 TSHZ3Q63HK5 1081 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 ZNF790Q6PG37 636 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 ACBD3Q9H3P7 528 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 NOP58Q9Y2X3 529 aaKnown RBP7.36□□□□□ -1.23
SCLT1-207ENST00000506233 CACNA1SQ13698 1873 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 ATP8B2P98198 1209 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 ST3GAL1Q11201 340 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 PTF1AQ7RTS3 328 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 NFATC2IPQ8NCF5 419 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 ANKRD31Q8N7Z5 1873 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 RASA1P20936 1047 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 FOXO4P98177 505 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 JAZF1Q86VZ6 243 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
SCLT1-207ENST00000506233 SEPT3Q9UH03 358 aa7.36□□□□□ -1.23
SCLT1-207ENST00000506233 CYP2E1P05181 493 aaPredicted RBP7.35□□□□□ -1.23
SCLT1-207ENST00000506233 SOX11P35716 441 aa7.35□□□□□ -1.23
SCLT1-207ENST00000506233 KIAA1024Q9UPX6 916 aa7.35□□□□□ -1.23
SCLT1-207ENST00000506233 PALLDQ8WX93 1383 aa7.35□□□□□ -1.23
SCLT1-207ENST00000506233 RIC1Q4ADV7 1423 aa7.35□□□□□ -1.23
SCLT1-207ENST00000506233 FDX1P10109 184 aa7.35□□□□□ -1.23
SCLT1-207ENST00000506233 DPYDQ12882 1025 aa7.35□□□□□ -1.23
SCLT1-207ENST00000506233 SDSP20132 328 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 RABL6Q3YEC7 729 aaPredicted RBP7.34□□□□□ -1.23
SCLT1-207ENST00000506233 DMGDHQ9UI17 866 aaKnown RBP7.34□□□□□ -1.23
SCLT1-207ENST00000506233 TCHHQ07283 1943 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 DKK1O94907 266 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 PIP4K2AP48426 406 aaPredicted RBP7.34□□□□□ -1.23
SCLT1-207ENST00000506233 CWF19L2Q2TBE0 894 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms