RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 USP17L20D6RJB6 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 FYB1O15117 783 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 ATP2B4P23634 1241 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 USP17L24Q0WX57 530 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 MAP9Q49MG5 647 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 CDCA7Q9BWT1 371 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 PANK2Q9BZ23 570 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 ST20-MTHFSA0A0A6YYL1 179 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 H7C1W4 665 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 TRIM37O94972 964 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 SKILP12757 684 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 MLECQ14165 292 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 MIGA1Q8NAN2 632 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 NPDC1Q9NQX5 325 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 SUN2Q9UH99 717 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 MKRN1Q9UHC7 482 aaKnown RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 COL11A2P13942 1736 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 TNRC6CQ9HCJ0 1690 aaKnown RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 SPDYE5A6NIY4 337 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 A6NJR5 290 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 CPP00450 1065 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 EVX2Q03828 476 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 RC3H1Q5TC82 1133 aaKnown RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 IQUBQ8NA54 791 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 IL17RAQ96F46 866 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 ADAM33Q9BZ11 813 aa2.78□□□□□ -1.96
NEDD4-205ENST00000506154 ARIH1Q9Y4X5 557 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-205ENST00000506154 ZC3H4Q9UPT8 1303 aaKnown RBP2.78□□□□□ -1.97
NEDD4-205ENST00000506154 PATL2C9JE40 543 aaKnown RBP2.78□□□□□ -1.97
NEDD4-205ENST00000506154 CDC25BP30305 580 aa2.78□□□□□ -1.97
NEDD4-205ENST00000506154 IL13P35225 146 aa2.78□□□□□ -1.97
NEDD4-205ENST00000506154 CCDC144BQ3MJ40 725 aa2.78□□□□□ -1.97
NEDD4-205ENST00000506154 CCDC125Q86Z20 511 aa2.78□□□□□ -1.97
NEDD4-205ENST00000506154 SUGP1Q8IWZ8 645 aaKnown RBP2.78□□□□□ -1.97
NEDD4-205ENST00000506154 ATP10DQ9P241 1426 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SPATA31A3Q5VYP0 1347 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 MINDY4BA8MYZ0 360 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SLC34A2O95436 690 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 FBXO45P0C2W1 286 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 TCF3P15923 654 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 MCM5P33992 734 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF579Q8NAF0 562 aaKnown RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF446Q9NWS9 450 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 PFDN2Q9UHV9 154 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 EXOC5O00471 708 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 DHX16O60231 1041 aaKnown RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 MAP4K4O95819 1239 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 POLR3DP05423 398 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 PSEN2P49810 448 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF157P51786 506 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 XPCQ01831 940 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 EN1Q05925 392 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 TBC1D22AQ8WUA7 517 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 GJD4Q96KN9 370 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF609O15014 1411 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 TLL1O43897 1013 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 P4HBP07237 508 aaKnown RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 MRE11P49959 708 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 CLDN10P78369 228 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 MYRIPQ8NFW9 859 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 FAXDC2Q96IV6 333 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 STK26Q9P289 416 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 RIPOR2Q9Y4F9 1068 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 PCDHGA10Q9Y5H3 936 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 ERBB3P21860 1342 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 IPO8O15397 1037 aaKnown RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 HMGN5P82970 282 aaKnown RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SLC5A9Q2M3M2 681 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 ILDR1Q86SU0 546 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SYNPO2Q9UMS6 1093 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SMC3Q9UQE7 1217 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 MORC2Q9Y6X9 1032 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 SPEF2Q9C093 1822 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 PPP1R12AO14974 1030 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 EP400NLQ6ZTU2 488 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 TPCN2Q8NHX9 752 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 TSR2Q969E8 191 aaKnown RBP2.77□□□□□ -1.97
NEDD4-205ENST00000506154 TERF2IPQ9NYB0 399 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 FOCADQ5VW36 1801 aa2.77□□□□□ -1.97
NEDD4-205ENST00000506154 C3orf67Q6ZVT6 689 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 ZSCAN30Q86W11 494 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 GPATCH3Q96I76 525 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 NBPF3Q9H094 633 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 SAP130Q9H0E3 1048 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 IGFLR1Q9H665 355 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 AMOTQ4VCS5 1084 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 FMNL3Q8IVF7 1028 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 FAM200AQ8TCP9 573 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 GPT2Q8TD30 523 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 MYCBPQ99417 103 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-205ENST00000506154 SPTLC3Q9NUV7 552 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 TSKSQ9UJT2 592 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 COLQQ9Y215 455 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-205ENST00000506154 RTN2O75298 545 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 NEFHP12036 1026 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 CLCN6P51797 869 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 HDLBPQ00341 1268 aaKnown RBP2.76□□□□□ -1.97
NEDD4-205ENST00000506154 TERF2Q15554 542 aa2.76□□□□□ -1.97
NEDD4-205ENST00000506154 RSBN1LQ6PCB5 846 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms