RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 JPH1Q9HDC5 661 aaPredicted RBP6.98□□□□□ -1.29
TOPBP1-204ENST00000505804 ZNF326Q5BKZ1 582 aaKnown RBP6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 EHD4Q9H223 541 aa6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 RRAGCQ9HB90 399 aa6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 FRRS1LQ9P0K9 344 aa6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 PARP2Q9UGN5 583 aa6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
TOPBP1-204ENST00000505804 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 PDE2AO00408 941 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 LILRB5O75023 590 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 SMNDC1O75940 238 aaKnown RBP eCLIP6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 FGD1P98174 961 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 KANK3Q6NY19 840 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 ADAMTSL4Q6UY14 1074 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 TTC9Q92623 222 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 ZNF428Q96B54 188 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 FAM161BQ96MY7 647 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 TCF12Q99081 682 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 LACRTQ9GZZ8 138 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 LIN7BQ9HAP6 207 aa6.96□□□□□ -1.3
TOPBP1-204ENST00000505804 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 AFF1P51825 1210 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 SNRPNP63162 240 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 INSM1Q01101 510 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 XPCQ01831 940 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 GRM2Q14416 872 aa6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 GRIK5Q16478 980 aa6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 NXPE4Q6UWF7 544 aa6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 TMEM102Q8N9M5 508 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 OSBPL7Q9BZF2 842 aa6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 SUV39H2Q9H5I1 410 aa6.95□□□□□ -1.3
TOPBP1-204ENST00000505804 METTL12A8MUP2 240 aa6.94□□□□□ -1.3
TOPBP1-204ENST00000505804 CCNJLQ8IV13 435 aa6.94□□□□□ -1.3
TOPBP1-204ENST00000505804 GLIS3Q8NEA6 775 aa6.94□□□□□ -1.3
TOPBP1-204ENST00000505804 ASAP3Q8TDY4 903 aa6.94□□□□□ -1.3
TOPBP1-204ENST00000505804 ADAMTS8Q9UP79 889 aa6.94□□□□□ -1.3
TOPBP1-204ENST00000505804 SPG7Q9UQ90 795 aa6.94□□□□□ -1.3
TOPBP1-204ENST00000505804 GNA15P30679 374 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 GRIA4P48058 902 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 DGKGP49619 791 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 DAB2P98082 770 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 PSMD2Q13200 908 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 IL22RA1Q8N6P7 574 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 BHLHE41Q9C0J9 482 aaPredicted RBP6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 PPP4R2Q9NY27 417 aa6.93□□□□□ -1.3
TOPBP1-204ENST00000505804 CDC25BP30305 580 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 LINC00114Q6XXX2 140 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 FRMD6Q96NE9 622 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 PRDM6Q9NQX0 595 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 SH2B1Q9NRF2 756 aaPredicted RBP6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 TRAK1Q9UPV9 953 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 AK5Q9Y6K8 562 aa6.92□□□□□ -1.3
TOPBP1-204ENST00000505804 A0A096LPE4 126 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 A0A1W2PPZ6 126 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 GIPC1O14908 333 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 NID1P14543 1247 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 PTPRAP18433 802 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 CDC27P30260 824 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 BAG6P46379 1132 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 FCGRTP55899 365 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 BSNDQ8WZ55 320 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 ADAM19Q9H013 955 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 MUC3BQ9H195 1237 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 ABCB6Q9NP58 842 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
TOPBP1-204ENST00000505804 UNCXA6NJT0 531 aa6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 SORBS3O60504 671 aa6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 EIF4BP23588 611 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 RBM25P49756 843 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 TRAPPC3LQ5T215 181 aa6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 WFDC8Q8IUA0 241 aa6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 MRS2Q9HD23 443 aa6.9□□□□□ -1.3
TOPBP1-204ENST00000505804 FAM177BA6PVY3 158 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 EPHA1P21709 976 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 DTHD1Q6ZMT9 781 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 VN1R5Q7Z5H4 357 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 BEND7Q8N7W2 519 aaPredicted RBP6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 TRIM11Q96F44 468 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 SRCIN1Q9C0H9 1055 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 MKL2Q9ULH7 1088 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
TOPBP1-204ENST00000505804 USP17L7P0C7H9 530 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 ITPKAP23677 461 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 TXNDC11Q6PKC3 985 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 ILDR2Q71H61 639 aa6.88□□□□□ -1.31
TOPBP1-204ENST00000505804 MRRFQ96E11 262 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms