RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PUM3Q15397 648 aaKnown RBP9.69□□□□□ -0.86
COL4A5-208ENST00000505728 MCMDC2Q4G0Z9 681 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 BICDL1Q6ZP65 573 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-208ENST00000505728 LPIN2Q92539 896 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 MAP4K1Q92918 833 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 FAM227BQ96M60 508 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 SEC31BQ9NQW1 1179 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 HELLSQ9NRZ9 838 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 CHMP5Q9NZZ3 219 aa9.69□□□□□ -0.86
COL4A5-208ENST00000505728 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
COL4A5-208ENST00000505728 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-208ENST00000505728 RIC1Q4ADV7 1423 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 MED23Q9ULK4 1368 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 ZFYP08048 801 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-208ENST00000505728 SSFA2P28290 1259 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 NEK4P51957 841 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 PTH1RQ03431 593 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 NECTIN1Q15223 517 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 PPP4R3CPQ6ZMV5 832 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 ANKRD18AQ8IVF6 992 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 EDC3Q96F86 508 aaKnown RBP9.68□□□□□ -0.86
COL4A5-208ENST00000505728 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-208ENST00000505728 PALD1Q9ULE6 856 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 SNX14Q9Y5W7 946 aa9.68□□□□□ -0.86
COL4A5-208ENST00000505728 A0A0D9SFI3 127 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 GOLIM4O00461 696 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 RNF113AO15541 343 aaKnown RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 TAF5LO75529 589 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 ZKSCAN1P17029 563 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 ARID4AP29374 1257 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 TTF1Q15361 905 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 ZMYM1Q5SVZ6 1142 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 DDX46Q7L014 1031 aaKnown RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 TM6SF1Q9BZW5 370 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 SLKQ9H2G2 1235 aaPredicted RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 HMG20BQ9P0W2 317 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
COL4A5-208ENST00000505728 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
COL4A5-208ENST00000505728 AKAP11Q9UKA4 1901 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 HSP90AA1P07900 732 aaKnown RBP9.66□□□□□ -0.86
COL4A5-208ENST00000505728 PSMA5P28066 241 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 KCNJ4P48050 445 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL4A5-208ENST00000505728 CHRNDQ07001 517 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
COL4A5-208ENST00000505728 CWC22Q9HCG8 908 aaKnown RBP9.66□□□□□ -0.86
COL4A5-208ENST00000505728 NDUFB9Q9Y6M9 179 aa9.66□□□□□ -0.86
COL4A5-208ENST00000505728 U3KPZ7 1027 aaPredicted RBP9.66□□□□□ -0.86
COL4A5-208ENST00000505728 DDIT3P35638 169 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 ZAP70P43403 619 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
COL4A5-208ENST00000505728 NFIXQ14938 502 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 CREB3L3Q68CJ9 461 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 CCDC102BQ68D86 513 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 RASEFQ8IZ41 740 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 SPRYD3Q8NCJ5 442 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
COL4A5-208ENST00000505728 DSCC1Q9BVC3 393 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL4A5-208ENST00000505728 ARFGEF1Q9Y6D6 1849 aa9.65□□□□□ -0.86
COL4A5-208ENST00000505728 MYH7P12883 1935 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 CARMIL3Q8ND23 1372 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 SLC27A2O14975 620 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 GYS1P13807 737 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 TM4SF1P30408 202 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 MCAMP43121 646 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 PHKA1P46020 1223 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 KRT32Q14532 448 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 NFKBIBQ15653 356 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
COL4A5-208ENST00000505728 ANKRD2Q9GZV1 360 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 ZSWIM6Q9HCJ5 1215 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 MINPP1Q9UNW1 487 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 ARAP2Q8WZ64 1704 aa9.64□□□□□ -0.87
COL4A5-208ENST00000505728 ZBTB22O15209 634 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 NPHP1O15259 732 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 MMP10P09238 476 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 CUL4AQ13619 759 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 SCARF1Q14162 830 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 UBE3CQ15386 1083 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-208ENST00000505728 APPBP2Q92624 585 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 CELF1Q92879 486 aaKnown RBP9.63□□□□□ -0.87
COL4A5-208ENST00000505728 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
COL4A5-208ENST00000505728 TMX3Q96JJ7 454 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 ZSCAN31Q96LW9 406 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-208ENST00000505728 TTC14Q96N46 770 aa9.63□□□□□ -0.87
COL4A5-208ENST00000505728 ALDH8A1Q9H2A2 487 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-208ENST00000505728 GNL3LQ9NVN8 582 aaKnown RBP9.63□□□□□ -0.87
COL4A5-208ENST00000505728 CYP46A1Q9Y6A2 500 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms