RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 C2orf49Q9BVC5 232 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
TRAPPC13-208ENST00000505553 DHX15O43143 795 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 ADAMTS4O75173 837 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 DEAF1O75398 565 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 LGR5O75473 907 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 ALX3O95076 343 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 C8AP07357 584 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 NPR3P17342 541 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 ZC3H6P61129 1189 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 CCINQ13939 588 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 BTLAQ7Z6A9 289 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 POU5F2Q8N7G0 328 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 GSX2Q9BZM3 304 aa6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 SRA1Q9HD15 236 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-208ENST00000505553 NDUFB5O43674 189 aa6□□□□□ -1.45
TRAPPC13-208ENST00000505553 GLB1P16278 677 aa6□□□□□ -1.45
TRAPPC13-208ENST00000505553 NFKB1P19838 968 aa6□□□□□ -1.45
TRAPPC13-208ENST00000505553 Q6ZS46 218 aa6□□□□□ -1.45
TRAPPC13-208ENST00000505553 SREK1Q8WXA9 508 aaKnown RBP6□□□□□ -1.45
TRAPPC13-208ENST00000505553 CITED4Q96RK1 184 aa6□□□□□ -1.45
TRAPPC13-208ENST00000505553 RBCK1Q9BYM8 510 aa6□□□□□ -1.45
TRAPPC13-208ENST00000505553 RECKO95980 971 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 NFIAQ12857 509 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 MTMR3Q13615 1198 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 NAA30Q147X3 362 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 PERM1Q5SV97 790 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 ASIC4Q96FT7 647 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 RTN1Q16799 776 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 TSNAXIP1Q2TAA8 658 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 ALKBH2Q6NS38 261 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 CAPN12Q6ZSI9 719 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 MAP4K3Q8IVH8 894 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 BRPF3Q9ULD4 1205 aa5.99□□□□□ -1.45
TRAPPC13-208ENST00000505553 MAP3K6O95382 1288 aa5.98□□□□□ -1.45
TRAPPC13-208ENST00000505553 SF3A1Q15459 793 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-208ENST00000505553 SCAMP3O14828 347 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 EPB42P16452 691 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 IER5Q5VY09 327 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 C16orf46Q6P387 395 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 TMC7Q7Z402 723 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 TRPM4Q8TD43 1214 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 TMC1Q8TDI8 760 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 DMRTB1Q96MA1 342 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 DBNDD2Q9BQY9 259 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 CEP41Q9BYV8 373 aa5.97□□□□□ -1.45
TRAPPC13-208ENST00000505553 TGFBR3LH3BV60 316 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 TREHO43280 583 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 P4HBP07237 508 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 MPSTP25325 297 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 XPCQ01831 940 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 PLCB3Q01970 1234 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 AAMPQ13685 434 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 UVSSAQ2YD98 709 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 RNF43Q68DV7 783 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 PUS7Q96PZ0 661 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 BACH2Q9BYV9 841 aa5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 SMG9Q9H0W8 520 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-208ENST00000505553 ERCC5P28715 1186 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 GPLD1P80108 840 aa5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 FMR1Q06787 632 aaKnown RBP eCLIP5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 PDE3BQ13370 1112 aa5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 MRPL58Q14197 206 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 NAALADL2Q58DX5 795 aa5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 DHX32Q7L7V1 743 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 UBXN4Q92575 508 aa5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
TRAPPC13-208ENST00000505553 PRR19A6NJB7 356 aa5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 CANXP27824 592 aaKnown RBP5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 PLAURQ03405 335 aa5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 UBL7Q96S82 380 aaPredicted RBP5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 C7orf69Q9H7B7 122 aa5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 MRS2Q9HD23 443 aa5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 STIM2Q9P246 746 aa5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 ANGEL1Q9UNK9 670 aaKnown RBP5.94□□□□□ -1.46
TRAPPC13-208ENST00000505553 ZBTB42B2RXF5 422 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 PRPF40AO75400 957 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 LDHBP07195 334 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 ATP2B2Q01814 1243 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 ABI1Q8IZP0 508 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 AGGF1Q8N302 714 aaeCLIP5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 ABTB2Q8N961 1025 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 UTP4Q969X6 686 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 KLK14Q9P0G3 267 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 DMGDHQ9UI17 866 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 BCS1LQ9Y276 419 aa5.93□□□□□ -1.46
TRAPPC13-208ENST00000505553 MAPK8P45983 427 aa5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 EIF1AXP47813 144 aaKnown RBP5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 IDH3AP50213 366 aa5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 DGKZQ13574 1117 aa5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 DSC3Q14574 896 aa5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 TRIM42Q8IWZ5 723 aa5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 ARMC10Q8N2F6 343 aa5.92□□□□□ -1.46
TRAPPC13-208ENST00000505553 SORBS3O60504 671 aa5.91□□□□□ -1.46
TRAPPC13-208ENST00000505553 MICAL2O94851 1124 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms