RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 MYH3P11055 1940 aa20.03■□□□□ 0.8
LIN54-204ENST00000505397 ZNF609O15014 1411 aa20.03■□□□□ 0.8
LIN54-204ENST00000505397 RREB1Q92766 1687 aa20.03■□□□□ 0.8
LIN54-204ENST00000505397 IL15P40933 162 aaPredicted RBP20.03■□□□□ 0.8
LIN54-204ENST00000505397 EIF5P55010 431 aaKnown RBP20.03■□□□□ 0.8
LIN54-204ENST00000505397 NOLC1Q14978 699 aaKnown RBP eCLIP20.03■□□□□ 0.8
LIN54-204ENST00000505397 TTC12Q9H892 705 aaPredicted RBP20.03■□□□□ 0.8
LIN54-204ENST00000505397 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.8
LIN54-204ENST00000505397 LIG1P18858 919 aa20.02■□□□□ 0.8
LIN54-204ENST00000505397 FAM173BQ6P4H8 233 aa20.02■□□□□ 0.8
LIN54-204ENST00000505397 INTS5Q6P9B9 1019 aaKnown RBP20.02■□□□□ 0.8
LIN54-204ENST00000505397 PLA2G12BQ9BX93 195 aa20.02■□□□□ 0.8
LIN54-204ENST00000505397 GTF3C6Q969F1 213 aa20.02■□□□□ 0.79
LIN54-204ENST00000505397 HAUS7Q99871 368 aa20.02■□□□□ 0.79
LIN54-204ENST00000505397 THSD7AQ9UPZ6 1657 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 ITPK1Q13572 414 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 RBM43Q6ZSC3 357 aaKnown RBP20.01■□□□□ 0.79
LIN54-204ENST00000505397 NEK1Q96PY6 1258 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
LIN54-204ENST00000505397 EYA2O00167 538 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 MAP3K11Q16584 847 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 NUP62CLQ9H1M0 184 aa20.01■□□□□ 0.79
LIN54-204ENST00000505397 TRMT112Q9UI30 125 aaKnown RBP20.01■□□□□ 0.79
LIN54-204ENST00000505397 U3KPZ7 1027 aaPredicted RBP20.01■□□□□ 0.79
LIN54-204ENST00000505397 COL5A3P25940 1745 aaPredicted RBP20.01■□□□□ 0.79
LIN54-204ENST00000505397 HSPA1LP34931 641 aa20■□□□□ 0.79
LIN54-204ENST00000505397 MPNDQ8N594 471 aa20■□□□□ 0.79
LIN54-204ENST00000505397 ZNF831Q5JPB2 1677 aa20■□□□□ 0.79
LIN54-204ENST00000505397 CIAO1O76071 339 aa20■□□□□ 0.79
LIN54-204ENST00000505397 FAM200AQ8TCP9 573 aa20■□□□□ 0.79
LIN54-204ENST00000505397 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
LIN54-204ENST00000505397 ZNF594Q96JF6 807 aaPredicted RBP20■□□□□ 0.79
LIN54-204ENST00000505397 MAP7D2Q96T17 732 aa20■□□□□ 0.79
LIN54-204ENST00000505397 MRVI1Q9Y6F6 885 aa20■□□□□ 0.79
LIN54-204ENST00000505397 ATG9AQ7Z3C6 839 aa19.99■□□□□ 0.79
LIN54-204ENST00000505397 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
LIN54-204ENST00000505397 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
LIN54-204ENST00000505397 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
LIN54-204ENST00000505397 TPM3P06753 285 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 CYP21A2P08686 494 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 STK3Q13188 491 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
LIN54-204ENST00000505397 SPATA32Q96LK8 384 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 GPR108Q9NPR9 543 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 TYRO3Q06418 890 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 MYRIPQ8NFW9 859 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 CCDC85AQ96PX6 553 aaPredicted RBP19.98■□□□□ 0.79
LIN54-204ENST00000505397 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 SH3TC1Q8TE82 1336 aa19.98■□□□□ 0.79
LIN54-204ENST00000505397 IRS4O14654 1257 aaPredicted RBP19.97■□□□□ 0.79
LIN54-204ENST00000505397 RESTQ13127 1097 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 LRRC24Q50LG9 513 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 TICAM2Q86XR7 235 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 PRIMPOLQ96LW4 560 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 DDX19AQ9NUU7 478 aaKnown RBP19.97■□□□□ 0.79
LIN54-204ENST00000505397 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 CHGBP05060 677 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 Q6ZUG5 572 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 ZNF34Q8IZ26 560 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 NEUROD6Q96NK8 337 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 SEC62Q99442 399 aaKnown RBP19.97■□□□□ 0.79
LIN54-204ENST00000505397 KCNF1Q9H3M0 494 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 AFF2P51816 1311 aa19.97■□□□□ 0.79
LIN54-204ENST00000505397 JAK2O60674 1132 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 CSF1RP07333 972 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 KBTBD3Q8NAB2 608 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 BTAF1O14981 1849 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 NHSQ6T4R5 1651 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 SMARCC2Q8TAQ2 1214 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 KIAA1524Q8TCG1 905 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 GJD4Q96KN9 370 aaPredicted RBP19.96■□□□□ 0.79
LIN54-204ENST00000505397 CLSTN2Q9H4D0 955 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 TFIP11Q9UBB9 837 aaKnown RBP19.96■□□□□ 0.79
LIN54-204ENST00000505397 UBN2Q6ZU65 1347 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 CTSWP56202 376 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 SYNE4Q8N205 404 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 PGBD1Q96JS3 809 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 TNMDQ9H2S6 317 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 CEP126Q9P2H0 1117 aa19.96■□□□□ 0.79
LIN54-204ENST00000505397 CAMK4Q16566 473 aa19.95■□□□□ 0.78
LIN54-204ENST00000505397 DNAJC2Q99543 621 aaKnown RBP19.95■□□□□ 0.78
LIN54-204ENST00000505397 GTF2F1P35269 517 aaKnown RBP eCLIP19.95■□□□□ 0.785e-7■■■■■ 29.3
LIN54-204ENST00000505397 BRF1Q92994 677 aa19.95■□□□□ 0.78
LIN54-204ENST00000505397 LLPHQ9BRT6 129 aaKnown RBP19.95■□□□□ 0.78
LIN54-204ENST00000505397 PDE8AO60658 829 aa19.94■□□□□ 0.78
LIN54-204ENST00000505397 HMGN5P82970 282 aaKnown RBP19.94■□□□□ 0.78
LIN54-204ENST00000505397 STOX1Q6ZVD7 989 aa19.94■□□□□ 0.78
LIN54-204ENST00000505397 PUS3Q9BZE2 481 aaKnown RBP19.94■□□□□ 0.78
LIN54-204ENST00000505397 ZSCAN16Q9H4T2 348 aaPredicted RBP19.94■□□□□ 0.78
LIN54-204ENST00000505397 ZNF652Q9Y2D9 606 aa19.94■□□□□ 0.78
LIN54-204ENST00000505397 PFKFB2O60825 505 aa19.94■□□□□ 0.78
LIN54-204ENST00000505397 CAMTA2O94983 1202 aa19.94■□□□□ 0.78
LIN54-204ENST00000505397 MTERF4Q7Z6M4 381 aaKnown RBP19.94■□□□□ 0.78
LIN54-204ENST00000505397 C17orf53Q8N3J3 647 aaPredicted RBP19.94■□□□□ 0.78
LIN54-204ENST00000505397 TTLL11Q8NHH1 800 aa19.94■□□□□ 0.78
LIN54-204ENST00000505397 LAMA4Q16363 1823 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms