RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 AMOTL2Q9Y2J4 779 aa6.83□□□□□ -1.32
LINC01088-202ENST00000505149 C1QTNF9BB2RNN3 333 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 C9orf172C9J069 976 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 MSTNO14793 375 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 EREGO14944 169 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 CHRNA4P43681 627 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
LINC01088-202ENST00000505149 SPOCK3Q9BQ16 436 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 KANSL3Q9P2N6 904 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 FOXD3Q9UJU5 478 aaPredicted RBP6.82□□□□□ -1.32
LINC01088-202ENST00000505149 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 TRIM33Q9UPN9 1127 aa6.82□□□□□ -1.32
LINC01088-202ENST00000505149 KRTAP4-8A0A0G2JLE6 195 aa6.81□□□□□ -1.32
LINC01088-202ENST00000505149 APBA3O96018 575 aa6.81□□□□□ -1.32
LINC01088-202ENST00000505149 NRG1Q02297 640 aaPredicted RBP6.81□□□□□ -1.32
LINC01088-202ENST00000505149 CEP135Q66GS9 1140 aa6.81□□□□□ -1.32
LINC01088-202ENST00000505149 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
LINC01088-202ENST00000505149 DNAJC25Q9H1X3 360 aa6.81□□□□□ -1.32
LINC01088-202ENST00000505149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.81□□□□□ -1.32
LINC01088-202ENST00000505149 IVNS1ABPQ9Y6Y0 642 aa6.81□□□□□ -1.32
LINC01088-202ENST00000505149 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 DLL1O00548 723 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 DEAF1O75398 565 aaPredicted RBP6.8□□□□□ -1.32
LINC01088-202ENST00000505149 SELPP16109 830 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 PTPRAP18433 802 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 ADGRE1Q14246 886 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 PEAR1Q5VY43 1037 aaPredicted RBP6.8□□□□□ -1.32
LINC01088-202ENST00000505149 GDF6Q6KF10 455 aaPredicted RBP6.8□□□□□ -1.32
LINC01088-202ENST00000505149 IGF2-ASQ6U949 168 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 GALNT12Q8IXK2 581 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 IL22RA1Q8N6P7 574 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 WNT8BQ93098 351 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 POP1Q99575 1024 aaKnown RBP6.8□□□□□ -1.32
LINC01088-202ENST00000505149 BHLHE41Q9C0J9 482 aaPredicted RBP6.8□□□□□ -1.32
LINC01088-202ENST00000505149 PPME1Q9Y570 386 aa6.8□□□□□ -1.32
LINC01088-202ENST00000505149 TM4SF5O14894 197 aa6.79□□□□□ -1.32
LINC01088-202ENST00000505149 GPR182O15218 404 aa6.79□□□□□ -1.32
LINC01088-202ENST00000505149 CDC27P30260 824 aa6.79□□□□□ -1.32
LINC01088-202ENST00000505149 SETDB1Q15047 1291 aa6.79□□□□□ -1.32
LINC01088-202ENST00000505149 GRIK4Q16099 956 aa6.79□□□□□ -1.32
LINC01088-202ENST00000505149 NXPE3Q969Y0 559 aa6.79□□□□□ -1.32
LINC01088-202ENST00000505149 PDE2AO00408 941 aaPredicted RBP6.78□□□□□ -1.32
LINC01088-202ENST00000505149 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
LINC01088-202ENST00000505149 ADAMTSL4Q6UY14 1074 aa6.78□□□□□ -1.32
LINC01088-202ENST00000505149 OSMRQ99650 979 aa6.78□□□□□ -1.32
LINC01088-202ENST00000505149 ZKSCAN3Q9BRR0 538 aa6.78□□□□□ -1.32
LINC01088-202ENST00000505149 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
LINC01088-202ENST00000505149 CPNE3O75131 537 aaKnown RBP6.77□□□□□ -1.33
LINC01088-202ENST00000505149 ACPPP15309 386 aa6.77□□□□□ -1.33
LINC01088-202ENST00000505149 DSC3Q14574 896 aa6.77□□□□□ -1.33
LINC01088-202ENST00000505149 MBTPS1Q14703 1052 aa6.77□□□□□ -1.33
LINC01088-202ENST00000505149 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
LINC01088-202ENST00000505149 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
LINC01088-202ENST00000505149 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
LINC01088-202ENST00000505149 BIN2Q9UBW5 565 aaPredicted RBP6.77□□□□□ -1.33
LINC01088-202ENST00000505149 H3BRJ5 948 aa6.76□□□□□ -1.33
LINC01088-202ENST00000505149 TREHO43280 583 aa6.76□□□□□ -1.33
LINC01088-202ENST00000505149 GATA4P43694 442 aa6.76□□□□□ -1.33
LINC01088-202ENST00000505149 KLHL23Q8NBE8 558 aa6.76□□□□□ -1.33
LINC01088-202ENST00000505149 BSNDQ8WZ55 320 aa6.76□□□□□ -1.33
LINC01088-202ENST00000505149 OSGEPQ9NPF4 335 aa6.76□□□□□ -1.33
LINC01088-202ENST00000505149 FAM177BA6PVY3 158 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
LINC01088-202ENST00000505149 EPHA1P21709 976 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 PIP4K2BP78356 416 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 ORC1Q13415 861 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 TXNRD3Q86VQ6 643 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 CCNJLQ8IV13 435 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 HHIPQ96QV1 700 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 LACRTQ9GZZ8 138 aa6.75□□□□□ -1.33
LINC01088-202ENST00000505149 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
LINC01088-202ENST00000505149 A0A1W2PP55 124 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 FSCN2O14926 492 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
LINC01088-202ENST00000505149 CABP4P57796 275 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 SHISA2Q6UWI4 295 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 ASB16Q96NS5 453 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 CSRNP1Q96S65 589 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 NIF3L1Q9GZT8 377 aa6.74□□□□□ -1.33
LINC01088-202ENST00000505149 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
LINC01088-202ENST00000505149 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 MAPK1P28482 360 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 PTPN12Q05209 780 aaKnown RBP6.73□□□□□ -1.33
LINC01088-202ENST00000505149 USPL1Q5W0Q7 1092 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 Q6ZS46 218 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 VN1R5Q7Z5H4 357 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-202ENST00000505149 GALNT11Q8NCW6 608 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 TMC1Q8TDI8 760 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 TCF12Q99081 682 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-202ENST00000505149 SH2B1Q9NRF2 756 aaPredicted RBP6.73□□□□□ -1.33
LINC01088-202ENST00000505149 LATS2Q9NRM7 1088 aa6.73□□□□□ -1.33
LINC01088-202ENST00000505149 TRPA1O75762 1119 aa6.72□□□□□ -1.33
LINC01088-202ENST00000505149 CD68P34810 354 aaPredicted RBP6.72□□□□□ -1.33
LINC01088-202ENST00000505149 FMR1Q06787 632 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC01088-202ENST00000505149 PRPF40BQ6NWY9 871 aaKnown RBP6.72□□□□□ -1.33
LINC01088-202ENST00000505149 SND1Q7KZF4 910 aaKnown RBP eCLIP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms