RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SNAP23O00161 211 aa15.79■□□□□ 0.12
CCSER1-205ENST00000505073 RFC4P35249 363 aa15.79■□□□□ 0.12
CCSER1-205ENST00000505073 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCSER1-205ENST00000505073 TRAPPC3LQ5T215 181 aa15.79■□□□□ 0.12
CCSER1-205ENST00000505073 ZNF772Q68DY9 489 aaPredicted RBP15.79■□□□□ 0.12
CCSER1-205ENST00000505073 SEC62Q99442 399 aaKnown RBP15.79■□□□□ 0.12
CCSER1-205ENST00000505073 UPF3BQ9BZI7 483 aaKnown RBP15.79■□□□□ 0.12
CCSER1-205ENST00000505073 CWC22Q9HCG8 908 aaKnown RBP15.79■□□□□ 0.12
CCSER1-205ENST00000505073 SNX14Q9Y5W7 946 aa15.79■□□□□ 0.12
CCSER1-205ENST00000505073 LAMB2P55268 1798 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 RBM10P98175 930 aaKnown RBP15.78■□□□□ 0.12
CCSER1-205ENST00000505073 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 LRP5O75197 1615 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 TAF5LO75529 589 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 PRPF40BQ6NWY9 871 aaKnown RBP15.78■□□□□ 0.12
CCSER1-205ENST00000505073 CCDC129Q6ZRS4 1044 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 COL4A1P02462 1669 aa15.78■□□□□ 0.12
CCSER1-205ENST00000505073 MROH5Q6ZUA9 1318 aa15.77■□□□□ 0.12
CCSER1-205ENST00000505073 RGL2O15211 777 aa15.77■□□□□ 0.12
CCSER1-205ENST00000505073 PKP1Q13835 747 aa15.77■□□□□ 0.12
CCSER1-205ENST00000505073 PI16Q6UXB8 463 aa15.77■□□□□ 0.12
CCSER1-205ENST00000505073 NBPF5PQ86XG9 351 aaPredicted RBP15.77■□□□□ 0.12
CCSER1-205ENST00000505073 SPEF2Q9C093 1822 aa15.77■□□□□ 0.12
CCSER1-205ENST00000505073 IGHMBP2P38935 993 aaKnown RBP15.77■□□□□ 0.11
CCSER1-205ENST00000505073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.77■□□□□ 0.11
CCSER1-205ENST00000505073 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.11
CCSER1-205ENST00000505073 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.11
CCSER1-205ENST00000505073 MCM5P33992 734 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 KCNJ4P48050 445 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 RTL9Q8NET4 1388 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.76■□□□□ 0.11
CCSER1-205ENST00000505073 ZAP70P43403 619 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
CCSER1-205ENST00000505073 GPT2Q8TD30 523 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 RFX7Q2KHR2 1363 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 TAF1P21675 1872 aa15.76■□□□□ 0.11
CCSER1-205ENST00000505073 UQCRHLA0A096LP55 91 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 UQCRHP07919 91 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 PUM3Q15397 648 aaKnown RBP15.75■□□□□ 0.11
CCSER1-205ENST00000505073 MAP4K1Q92918 833 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 FAM13BQ9NYF5 915 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 FGFR2P21802 821 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 PHKA1P46020 1223 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 SF3B3Q15393 1217 aaKnown RBP15.75■□□□□ 0.11
CCSER1-205ENST00000505073 NYXQ9GZU5 481 aa15.75■□□□□ 0.11
CCSER1-205ENST00000505073 PRPF40AO75400 957 aaKnown RBP15.74■□□□□ 0.11
CCSER1-205ENST00000505073 MCAMP43121 646 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 NECTIN1Q15223 517 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 SLC10A5Q5PT55 438 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 LPIN2Q92539 896 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 RBM27Q9P2N5 1060 aaKnown RBP15.74■□□□□ 0.11
CCSER1-205ENST00000505073 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 LRSAM1Q6UWE0 723 aa15.74■□□□□ 0.11
CCSER1-205ENST00000505073 CDC5LQ99459 802 aaKnown RBP15.74■□□□□ 0.11
CCSER1-205ENST00000505073 CPA1P15085 419 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 CREB3L3Q68CJ9 461 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 CCDC102BQ68D86 513 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 TPTE2Q6XPS3 522 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 PROM2Q8N271 834 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 COL24A1Q17RW2 1714 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 CHRNDQ07001 517 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 NFIXQ14938 502 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 ADCK5Q3MIX3 580 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 ANKRD18AQ8IVF6 992 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 CCDC39Q9UFE4 941 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 CASZ1Q86V15 1759 aa15.73■□□□□ 0.11
CCSER1-205ENST00000505073 NPHP1O15259 732 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 RNF113AO15541 343 aaKnown RBP15.72■□□□□ 0.11
CCSER1-205ENST00000505073 SLC5A1P13866 664 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 MTERF4Q7Z6M4 381 aaKnown RBP15.72■□□□□ 0.11
CCSER1-205ENST00000505073 ZGPATQ8N5A5 531 aaKnown RBP15.72■□□□□ 0.11
CCSER1-205ENST00000505073 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
CCSER1-205ENST00000505073 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 SLC27A2O14975 620 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 ZMYM1Q5SVZ6 1142 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 UBR3Q6ZT12 1888 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 ZDHHC9Q9Y397 364 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 AKAP11Q9UKA4 1901 aa15.72■□□□□ 0.11
CCSER1-205ENST00000505073 CASTP20810 708 aaKnown RBP15.71■□□□□ 0.11
CCSER1-205ENST00000505073 KCNB2Q92953 911 aa15.71■□□□□ 0.11
CCSER1-205ENST00000505073 TMX3Q96JJ7 454 aa15.71■□□□□ 0.11
CCSER1-205ENST00000505073 JAKMIP1Q96N16 626 aaKnown RBP15.71■□□□□ 0.11
CCSER1-205ENST00000505073 TMEM63CQ9P1W3 806 aa15.71■□□□□ 0.11
CCSER1-205ENST00000505073 TAF6LQ9Y6J9 622 aa15.71■□□□□ 0.11
CCSER1-205ENST00000505073 ADRA2BP18089 450 aa15.71■□□□□ 0.11
CCSER1-205ENST00000505073 WTIPA6NIX2 430 aaPredicted RBP15.71■□□□□ 0.1
CCSER1-205ENST00000505073 RXRBP28702 533 aa15.71■□□□□ 0.1
CCSER1-205ENST00000505073 HELLSQ9NRZ9 838 aa15.71■□□□□ 0.1
CCSER1-205ENST00000505073 SYCE3A1L190 88 aa15.7■□□□□ 0.1
CCSER1-205ENST00000505073 ZKSCAN1P17029 563 aaPredicted RBP15.7■□□□□ 0.1
CCSER1-205ENST00000505073 VPS53Q5VIR6 699 aa15.7■□□□□ 0.1
CCSER1-205ENST00000505073 SASS6Q6UVJ0 657 aa15.7■□□□□ 0.1
CCSER1-205ENST00000505073 ZNF512BQ96KM6 892 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms