RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 C4AP0C0L4 1744 aa6.65□□□□□ -1.35
CDH9-203ENST00000505045 ARID5BQ14865 1188 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 TPRNQ4KMQ1 711 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 MPRIPQ6WCQ1 1025 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 SMIM5Q71RC9 77 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 CCNL1Q9UK58 526 aaPredicted RBP6.64□□□□□ -1.35
CDH9-203ENST00000505045 MYH14Q7Z406 1995 aaKnown RBP6.64□□□□□ -1.35
CDH9-203ENST00000505045 TJP1Q07157 1748 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 KDRP35968 1356 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 VSIG8P0DPA2 414 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 PHKG2P15735 406 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 IRS1P35568 1242 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 SLC27A3Q5K4L6 730 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 MORC1Q86VD1 984 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 PIGBQ92521 554 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 ITPKCQ96DU7 683 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 TRIM34Q9BYJ4 488 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 MTFR1LQ9H019 292 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 ZFAND3Q9H8U3 227 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 PPP1R1BQ9UD71 204 aaPredicted RBP6.64□□□□□ -1.35
CDH9-203ENST00000505045 GPSM3Q9Y4H4 160 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 ADAMTS7Q9UKP4 1686 aa6.64□□□□□ -1.35
CDH9-203ENST00000505045 ZNF831Q5JPB2 1677 aa6.63□□□□□ -1.35
CDH9-203ENST00000505045 MAGEB6P1A0A0J9YX57 407 aa6.63□□□□□ -1.35
CDH9-203ENST00000505045 CC2D1BQ5T0F9 858 aaKnown RBP6.63□□□□□ -1.35
CDH9-203ENST00000505045 MRPL14Q6P1L8 145 aaKnown RBP6.63□□□□□ -1.35
CDH9-203ENST00000505045 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
CDH9-203ENST00000505045 ARHGAP9Q9BRR9 750 aa6.63□□□□□ -1.35
CDH9-203ENST00000505045 FHDC1Q9C0D6 1143 aaPredicted RBP6.63□□□□□ -1.35
CDH9-203ENST00000505045 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
CDH9-203ENST00000505045 IL13P35225 146 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
CDH9-203ENST00000505045 TMEM259Q4ZIN3 620 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 ASAP1Q9ULH1 1129 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 CICQ96RK0 1608 aaPredicted RBP6.62□□□□□ -1.35
CDH9-203ENST00000505045 CHD4Q14839 1912 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 FSHRP23945 695 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 ITPK1Q13572 414 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 MSL1Q68DK7 614 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 VASH1Q7L8A9 365 aaPredicted RBP6.62□□□□□ -1.35
CDH9-203ENST00000505045 COL23A1Q86Y22 540 aaPredicted RBP6.62□□□□□ -1.35
CDH9-203ENST00000505045 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 SLC4A9Q96Q91 983 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 TFCP2L1Q9NZI6 479 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 SPG7Q9UQ90 795 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 CEP350Q5VT06 3117 aa6.62□□□□□ -1.35
CDH9-203ENST00000505045 SIPA1L3O60292 1781 aaPredicted RBP6.61□□□□□ -1.35
CDH9-203ENST00000505045 UBR2Q8IWV8 1755 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 MRC1P22897 1456 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 KIAA1551Q9HCM1 1747 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 MTHFSP49914 203 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 SULT6B1Q6IMI4 303 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 SYT17Q9BSW7 474 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 PLEKHG2Q9H7P9 1386 aa6.61□□□□□ -1.35
CDH9-203ENST00000505045 LOC102724428A0A0B4J2F2 783 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 SIK1P57059 783 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 PTK2Q05397 1052 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 ZNF530Q6P9A1 599 aaPredicted RBP6.6□□□□□ -1.35
CDH9-203ENST00000505045 IFNL2Q8IZJ0 200 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 MEIOBQ8N635 442 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 ARXQ96QS3 562 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 TMOD3Q9NYL9 352 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 MAP3K5Q99683 1374 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 MSTNO14793 375 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 HMOX1P09601 288 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 CCDC116Q8IYX3 515 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 NLGN2Q8NFZ4 835 aa6.6□□□□□ -1.35
CDH9-203ENST00000505045 CDV3Q9UKY7 258 aaKnown RBP6.6□□□□□ -1.35
CDH9-203ENST00000505045 NPC1L1Q9UHC9 1359 aa6.59□□□□□ -1.35
CDH9-203ENST00000505045 KCPQ6ZWJ8 1503 aa6.59□□□□□ -1.35
CDH9-203ENST00000505045 ADAM32Q8TC27 787 aa6.59□□□□□ -1.35
CDH9-203ENST00000505045 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
CDH9-203ENST00000505045 KIF13BQ9NQT8 1826 aa6.58□□□□□ -1.36
CDH9-203ENST00000505045 KANK3Q6NY19 840 aa6.58□□□□□ -1.36
CDH9-203ENST00000505045 ZBTB33Q86T24 672 aa6.58□□□□□ -1.36
CDH9-203ENST00000505045 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
CDH9-203ENST00000505045 N4BP2Q86UW6 1770 aaPredicted RBP6.58□□□□□ -1.36
CDH9-203ENST00000505045 DLG5Q8TDM6 1919 aa6.58□□□□□ -1.36
CDH9-203ENST00000505045 BRCA1P38398 1863 aaKnown RBP6.57□□□□□ -1.36
CDH9-203ENST00000505045 SCARF1Q14162 830 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 SMARCC1Q92922 1105 aaPredicted RBP6.57□□□□□ -1.36
CDH9-203ENST00000505045 SLC10A4Q96EP9 437 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 DCAF5Q96JK2 942 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 PLEKHO1Q53GL0 409 aaPredicted RBP6.57□□□□□ -1.36
CDH9-203ENST00000505045 INTS6LQ5JSJ4 861 aaKnown RBP6.57□□□□□ -1.36
CDH9-203ENST00000505045 PPP1R26Q5T8A7 1209 aaPredicted RBP6.57□□□□□ -1.36
CDH9-203ENST00000505045 Q6ZVU0 165 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 PNMA1Q8ND90 353 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
CDH9-203ENST00000505045 ESPNB1AK53 854 aa6.56□□□□□ -1.36
CDH9-203ENST00000505045 ERVV-2B6SEH9 535 aa6.56□□□□□ -1.36
CDH9-203ENST00000505045 DIAPH1O60610 1272 aaKnown RBP6.56□□□□□ -1.36
CDH9-203ENST00000505045 GPR37L1O60883 481 aa6.56□□□□□ -1.36
CDH9-203ENST00000505045 YY1P25490 414 aa6.56□□□□□ -1.36
CDH9-203ENST00000505045 MTHFSDQ2M296 383 aaKnown RBP6.56□□□□□ -1.36
CDH9-203ENST00000505045 AMOTQ4VCS5 1084 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms