RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 SMG9Q9H0W8 520 aaKnown RBP8.12□□□□□ -1.11
TRAPPC13-205ENST00000504243 PARP2Q9UGN5 583 aa8.12□□□□□ -1.11
TRAPPC13-205ENST00000504243 CYP2E1P05181 493 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC13-205ENST00000504243 AFF1P51825 1210 aaKnown RBP8.11□□□□□ -1.11
TRAPPC13-205ENST00000504243 C8orf86Q6ZUL3 223 aa8.11□□□□□ -1.11
TRAPPC13-205ENST00000504243 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
TRAPPC13-205ENST00000504243 PLD4Q96BZ4 506 aa8.11□□□□□ -1.11
TRAPPC13-205ENST00000504243 DNAJC25Q9H1X3 360 aa8.11□□□□□ -1.11
TRAPPC13-205ENST00000504243 NID1P14543 1247 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 ITGAEP38570 1179 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 RASSF7Q02833 373 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 TSNAXIP1Q2TAA8 658 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 COL13A1Q5TAT6 717 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 TRIM11Q96F44 468 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 NLRP2Q9NX02 1062 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 SALL4Q9UJQ4 1053 aa8.1□□□□□ -1.11
TRAPPC13-205ENST00000504243 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 COL9A3Q14050 684 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 CHRDQ9H2X0 955 aa8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 ZFYVE28Q9HCC9 887 aa8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 KANSL3Q9P2N6 904 aa8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
TRAPPC13-205ENST00000504243 SORBS3O60504 671 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 EDN3P14138 238 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 MSL1Q68DK7 614 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 CEP120Q8N960 986 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 RNF19AQ9NV58 838 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
TRAPPC13-205ENST00000504243 EREGO14944 169 aa8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 GADD45BO75293 160 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 GDF11O95390 407 aa8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 GRIK5Q16478 980 aa8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 PRRT3Q5FWE3 981 aa8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 FBF1Q8TES7 1133 aa8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
TRAPPC13-205ENST00000504243 GSK3AP49840 483 aa8.06□□□□□ -1.12
TRAPPC13-205ENST00000504243 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-205ENST00000504243 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
TRAPPC13-205ENST00000504243 WFDC8Q8IUA0 241 aa8.06□□□□□ -1.12
TRAPPC13-205ENST00000504243 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-205ENST00000504243 FAM177BA6PVY3 158 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 SPATA31C1P0DKV0 1188 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 COL8A1P27658 744 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 GNA15P30679 374 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 RAC1P63000 192 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 DAB2P98082 770 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 TMC4Q7Z404 712 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 DTWD1Q8N5C7 304 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 DCAF5Q96JK2 942 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 MUC3BQ9H195 1237 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
TRAPPC13-205ENST00000504243 ATP11AP98196 1134 aa8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 PI16Q6UXB8 463 aa8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 DMRTC2Q8IXT2 367 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 IL22RA1Q8N6P7 574 aa8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 TMEM87AQ8NBN3 555 aa8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 DZANK1Q9NVP4 752 aa8.04□□□□□ -1.12
TRAPPC13-205ENST00000504243 EIF4BP23588 611 aaKnown RBP8.03□□□□□ -1.12
TRAPPC13-205ENST00000504243 GALNT12Q8IXK2 581 aa8.03□□□□□ -1.12
TRAPPC13-205ENST00000504243 FRMD6Q96NE9 622 aa8.03□□□□□ -1.12
TRAPPC13-205ENST00000504243 BACH2Q9BYV9 841 aa8.03□□□□□ -1.12
TRAPPC13-205ENST00000504243 TRIM33Q9UPN9 1127 aa8.03□□□□□ -1.12
TRAPPC13-205ENST00000504243 A0A0A0MRY4 1105 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 TCF3P15923 654 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 PTPRAP18433 802 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 VAMP1P23763 118 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 TMEM102Q8N9M5 508 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 DCAF11Q8TEB1 546 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 OSMRQ99650 979 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 SRA1Q9HD15 236 aaKnown RBP8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 PPP4R2Q9NY27 417 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 AK5Q9Y6K8 562 aa8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC13-205ENST00000504243 NFKBIEO00221 500 aa8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 PDE2AO00408 941 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 CDC27P30260 824 aa8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 MRPL58Q14197 206 aaKnown RBP8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 NACC1Q96RE7 527 aa8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 POP1Q99575 1024 aaKnown RBP8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 EHD4Q9H223 541 aa8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 PPME1Q9Y570 386 aa8.01□□□□□ -1.13
TRAPPC13-205ENST00000504243 RECKO95980 971 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 APBA3O96018 575 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 ACPPP15309 386 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 BAG6P46379 1132 aa8□□□□□ -1.13
TRAPPC13-205ENST00000504243 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
TRAPPC13-205ENST00000504243 NXPE4Q6UWF7 544 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms