RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 ANKRD44Q8N8A2 993 aa22.74■■□□□ 1.23
SH3TC1-208ENST00000504223 VEGFBP49765 207 aa22.73■■□□□ 1.23
SH3TC1-208ENST00000504223 AGBL3Q8NEM8 1001 aa22.73■■□□□ 1.23
SH3TC1-208ENST00000504223 GMLQ99445 158 aa22.73■■□□□ 1.23
SH3TC1-208ENST00000504223 BICC1Q9H694 974 aaKnown RBP22.73■■□□□ 1.23
SH3TC1-208ENST00000504223 IRS2Q9Y4H2 1338 aa22.73■■□□□ 1.23
SH3TC1-208ENST00000504223 USP17L3A6NCW0 530 aa22.72■■□□□ 1.23
SH3TC1-208ENST00000504223 USP17L4A6NCW7 530 aa22.72■■□□□ 1.23
SH3TC1-208ENST00000504223 ZNF280AP59817 542 aaPredicted RBP22.72■■□□□ 1.23
SH3TC1-208ENST00000504223 RABL6Q3YEC7 729 aaPredicted RBP22.72■■□□□ 1.23
SH3TC1-208ENST00000504223 USP17L1Q7RTZ2 530 aa22.72■■□□□ 1.23
SH3TC1-208ENST00000504223 HELBQ8NG08 1087 aaPredicted RBP22.72■■□□□ 1.23
SH3TC1-208ENST00000504223 POLR2AP24928 1970 aaKnown RBP22.71■■□□□ 1.23
SH3TC1-208ENST00000504223 TAF5LO75529 589 aa22.71■■□□□ 1.23
SH3TC1-208ENST00000504223 CDC37L1Q7L3B6 337 aa22.71■■□□□ 1.23
SH3TC1-208ENST00000504223 COA1Q9GZY4 146 aa22.71■■□□□ 1.23
SH3TC1-208ENST00000504223 ABT1Q9ULW3 272 aaKnown RBP22.71■■□□□ 1.23
SH3TC1-208ENST00000504223 HSPA1AP0DMV8 641 aaKnown RBP22.7■■□□□ 1.22
SH3TC1-208ENST00000504223 HSPA1BP0DMV9 641 aaKnown RBP22.7■■□□□ 1.22
SH3TC1-208ENST00000504223 CCDC57Q2TAC2 916 aa22.7■■□□□ 1.22
SH3TC1-208ENST00000504223 KIF4BQ2VIQ3 1234 aa22.7■■□□□ 1.22
SH3TC1-208ENST00000504223 DEFB115Q30KQ5 88 aa22.7■■□□□ 1.22
SH3TC1-208ENST00000504223 DACT2Q5SW24 774 aa22.69■■□□□ 1.22
SH3TC1-208ENST00000504223 RBM26Q5T8P6 1007 aaKnown RBP22.69■■□□□ 1.22
SH3TC1-208ENST00000504223 PUS3Q9BZE2 481 aaKnown RBP22.69■■□□□ 1.22
SH3TC1-208ENST00000504223 TNNQ9UQP3 1299 aa22.69■■□□□ 1.22
SH3TC1-208ENST00000504223 TRPM7Q96QT4 1865 aa22.68■■□□□ 1.22
SH3TC1-208ENST00000504223 TLL2Q9Y6L7 1015 aa22.68■■□□□ 1.22
SH3TC1-208ENST00000504223 BCAR3O75815 825 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 USP17L8P0C7I0 530 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 KCNJ4P48050 445 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 STRIP1Q5VSL9 837 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 DLK2Q6UY11 383 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 LDHAL6AQ6ZMR3 332 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 C15orf52Q6ZUT6 534 aaKnown RBP22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 USP48Q86UV5 1035 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 MXD3Q9BW11 206 aa22.67■■□□□ 1.22
SH3TC1-208ENST00000504223 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
SH3TC1-208ENST00000504223 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
SH3TC1-208ENST00000504223 WDR33Q9C0J8 1336 aaKnown RBP22.65■■□□□ 1.22
SH3TC1-208ENST00000504223 TAF7LQ5H9L4 462 aa22.65■■□□□ 1.22
SH3TC1-208ENST00000504223 KRT26Q7Z3Y9 468 aa22.65■■□□□ 1.22
SH3TC1-208ENST00000504223 SAPCD2Q86UD0 394 aa22.65■■□□□ 1.22
SH3TC1-208ENST00000504223 MYOZ2Q9NPC6 264 aa22.65■■□□□ 1.22
SH3TC1-208ENST00000504223 CNNM1Q9NRU3 951 aa22.65■■□□□ 1.22
SH3TC1-208ENST00000504223 THSD7BQ9C0I4 1608 aa22.64■■□□□ 1.22
SH3TC1-208ENST00000504223 ZBED9Q6R2W3 1325 aa22.64■■□□□ 1.22
SH3TC1-208ENST00000504223 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
SH3TC1-208ENST00000504223 KIF16BQ96L93 1317 aa22.64■■□□□ 1.22
SH3TC1-208ENST00000504223 ADM5C9JUS6 153 aa22.64■■□□□ 1.21
SH3TC1-208ENST00000504223 KLHDC4Q8TBB5 520 aa22.64■■□□□ 1.21
SH3TC1-208ENST00000504223 DCPSQ96C86 337 aaKnown RBP22.64■■□□□ 1.21
SH3TC1-208ENST00000504223 CD209Q9NNX6 404 aa22.64■■□□□ 1.21
SH3TC1-208ENST00000504223 GGA3Q9NZ52 723 aa22.64■■□□□ 1.21
SH3TC1-208ENST00000504223 RIPOR2Q9Y4F9 1068 aa22.64■■□□□ 1.21
SH3TC1-208ENST00000504223 PLIN1O60240 522 aa22.63■■□□□ 1.21
SH3TC1-208ENST00000504223 LRRC24Q50LG9 513 aa22.63■■□□□ 1.21
SH3TC1-208ENST00000504223 TRIM27P14373 513 aa22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 RFX5P48382 616 aaPredicted RBP22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 SCARF1Q14162 830 aa22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 COL13A1Q5TAT6 717 aaPredicted RBP22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 ARHGAP45Q92619 1136 aa22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 FBXW7Q969H0 707 aa22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 CAPNS2Q96L46 248 aa22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 ZNF408Q9H9D4 720 aa22.62■■□□□ 1.21
SH3TC1-208ENST00000504223 IFFO2Q5TF58 517 aa22.61■■□□□ 1.21
SH3TC1-208ENST00000504223 ANGEL2Q5VTE6 544 aaKnown RBP22.61■■□□□ 1.21
SH3TC1-208ENST00000504223 TTLL5Q6EMB2 1281 aa22.61■■□□□ 1.21
SH3TC1-208ENST00000504223 CYP4F22Q6NT55 531 aa22.61■■□□□ 1.21
SH3TC1-208ENST00000504223 HHIPL1Q96JK4 782 aa22.61■■□□□ 1.21
SH3TC1-208ENST00000504223 MEIS3Q99687 375 aa22.61■■□□□ 1.21
SH3TC1-208ENST00000504223 IL1R1P14778 569 aa22.6■■□□□ 1.21
SH3TC1-208ENST00000504223 GTF2IP78347 998 aa22.6■■□□□ 1.21
SH3TC1-208ENST00000504223 INTS3Q68E01 1043 aaKnown RBP22.6■■□□□ 1.21
SH3TC1-208ENST00000504223 WBP1LQ9NX94 342 aa22.6■■□□□ 1.21
SH3TC1-208ENST00000504223 UBTFL1P0CB47 393 aaPredicted RBP22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 ECE1P42892 770 aa22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 ZNF804AQ7Z570 1209 aa22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 SULF1Q8IWU6 871 aa22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 OGFOD1Q8N543 542 aa22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 VGLL2Q8N8G2 317 aa22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 LRRFIP2Q9Y608 721 aaKnown RBP22.59■■□□□ 1.21
SH3TC1-208ENST00000504223 MROH5Q6ZUA9 1318 aa22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 PITPNM2Q9BZ72 1349 aa22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 FOXN1O15353 648 aa22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 MMP14P50281 582 aa22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 NBPF9Q3BBW0 867 aa22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 ATF7IPQ6VMQ6 1270 aa22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
SH3TC1-208ENST00000504223 PTPN12Q05209 780 aaKnown RBP22.57■■□□□ 1.2
SH3TC1-208ENST00000504223 UBE4AQ14139 1066 aa22.57■■□□□ 1.2
SH3TC1-208ENST00000504223 KIAA0825Q8IV33 1275 aa22.57■■□□□ 1.2
SH3TC1-208ENST00000504223 CERS5Q8N5B7 392 aa22.57■■□□□ 1.2
SH3TC1-208ENST00000504223 FRAT1Q92837 279 aaPredicted RBP22.57■■□□□ 1.2
SH3TC1-208ENST00000504223 WNT10BO00744 389 aa22.56■■□□□ 1.2
SH3TC1-208ENST00000504223 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
SH3TC1-208ENST00000504223 CDCA5Q96FF9 252 aa22.56■■□□□ 1.2
SH3TC1-208ENST00000504223 GYG1P46976 350 aa22.55■■□□□ 1.2
SH3TC1-208ENST00000504223 MAP2K1Q02750 393 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms