RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 C9orf78Q9NZ63 289 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-219ENST00000504010 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
NR1I3-219ENST00000504010 IBTKQ9P2D0 1353 aaPredicted RBP11.4□□□□□ -0.59
NR1I3-219ENST00000504010 SH3TC1Q8TE82 1336 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 H7C1W4 665 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-219ENST00000504010 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-219ENST00000504010 CASP7P55210 303 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 KIF23Q02241 960 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-219ENST00000504010 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
NR1I3-219ENST00000504010 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-219ENST00000504010 RBM17Q96I25 401 aaKnown RBP11.39□□□□□ -0.59
NR1I3-219ENST00000504010 USP44Q9H0E7 712 aa11.39□□□□□ -0.59
NR1I3-219ENST00000504010 H7C1D1 291 aa11.38□□□□□ -0.59
NR1I3-219ENST00000504010 GRM8O00222 908 aa11.38□□□□□ -0.59
NR1I3-219ENST00000504010 DSG3P32926 999 aa11.38□□□□□ -0.59
NR1I3-219ENST00000504010 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
NR1I3-219ENST00000504010 ZNF157P51786 506 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-219ENST00000504010 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
NR1I3-219ENST00000504010 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
NR1I3-219ENST00000504010 RTFDC1Q9BY42 306 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-219ENST00000504010 GBA2Q9HCG7 927 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-219ENST00000504010 HIRAP54198 1017 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-219ENST00000504010 AOC3Q16853 763 aa11.37□□□□□ -0.59
NR1I3-219ENST00000504010 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
NR1I3-219ENST00000504010 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-219ENST00000504010 CHMP3Q9Y3E7 222 aa11.37□□□□□ -0.59
NR1I3-219ENST00000504010 ATP6V0A2Q9Y487 856 aa11.37□□□□□ -0.59
NR1I3-219ENST00000504010 DDX60Q8IY21 1712 aaKnown RBP11.36□□□□□ -0.59
NR1I3-219ENST00000504010 SLC10A3P09131 477 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 NOM1Q5C9Z4 860 aaKnown RBP11.36□□□□□ -0.59
NR1I3-219ENST00000504010 DPF2Q92785 391 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 CSRNP1Q96S65 589 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 CNOT7Q9UIV1 285 aaKnown RBP11.36□□□□□ -0.59
NR1I3-219ENST00000504010 LRRFIP2Q9Y608 721 aaKnown RBP11.36□□□□□ -0.59
NR1I3-219ENST00000504010 CEP290O15078 2479 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 SZT2Q5T011 3432 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 COL4A1P02462 1669 aa11.36□□□□□ -0.59
NR1I3-219ENST00000504010 PDE8AO60658 829 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-219ENST00000504010 UBTFL1P0CB47 393 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-219ENST00000504010 FOXO4P98177 505 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 MVPQ14764 893 aaKnown RBP11.35□□□□□ -0.59
NR1I3-219ENST00000504010 LMBR1LQ6UX01 489 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 KRT26Q7Z3Y9 468 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 TRPM4Q8TD43 1214 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
NR1I3-219ENST00000504010 HDAC9Q9UKV0 1011 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 LAMB2P55268 1798 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 TAF1P21675 1872 aa11.35□□□□□ -0.59
NR1I3-219ENST00000504010 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-219ENST00000504010 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
NR1I3-219ENST00000504010 FBXO46Q6PJ61 603 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-219ENST00000504010 DPP8Q6V1X1 898 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-219ENST00000504010 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
NR1I3-219ENST00000504010 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
NR1I3-219ENST00000504010 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-219ENST00000504010 GREM2Q9H772 168 aa11.34□□□□□ -0.59
NR1I3-219ENST00000504010 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
NR1I3-219ENST00000504010 BRCA2P51587 3418 aa11.34□□□□□ -0.59
NR1I3-219ENST00000504010 RANBP2P49792 3224 aaKnown RBP11.33□□□□□ -0.6
NR1I3-219ENST00000504010 BBOX1O75936 387 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 RAD17O75943 681 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 CTSWP56202 376 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 MICALL2Q8IY33 904 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 ANKRD44Q8N8A2 993 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 TTLL11Q8NHH1 800 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 KLHDC4Q8TBB5 520 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
NR1I3-219ENST00000504010 UTYO14607 1347 aa11.33□□□□□ -0.6
NR1I3-219ENST00000504010 RPS12P25398 132 aaKnown RBP11.32□□□□□ -0.6
NR1I3-219ENST00000504010 FKBP1BP68106 108 aa11.32□□□□□ -0.6
NR1I3-219ENST00000504010 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
NR1I3-219ENST00000504010 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
NR1I3-219ENST00000504010 GNAI3P08754 354 aa11.31□□□□□ -0.6
NR1I3-219ENST00000504010 MS4A1P11836 297 aa11.31□□□□□ -0.6
NR1I3-219ENST00000504010 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
NR1I3-219ENST00000504010 DDX46Q7L014 1031 aaKnown RBP11.31□□□□□ -0.6
NR1I3-219ENST00000504010 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
NR1I3-219ENST00000504010 MPNDQ8N594 471 aa11.31□□□□□ -0.6
NR1I3-219ENST00000504010 ZNF296Q8WUU4 475 aaPredicted RBP11.31□□□□□ -0.6
NR1I3-219ENST00000504010 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
NR1I3-219ENST00000504010 COL6A3P12111 3177 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 KIAA0100Q14667 2235 aaKnown RBP11.3□□□□□ -0.6
NR1I3-219ENST00000504010 PNMA6EA0A0J9YXQ4 647 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 GNAI2P04899 355 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 CSF1RP07333 972 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 ITGA6P23229 1130 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
NR1I3-219ENST00000504010 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 PLA2G12BQ9BX93 195 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 PUS3Q9BZE2 481 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms