RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 C3orf58Q8NDZ4 430 aa10.31□□□□□ -0.76
NEDD4-203ENST00000502612 IRF7Q92985 503 aa10.31□□□□□ -0.76
NEDD4-203ENST00000502612 ACDQ96AP0 544 aa10.31□□□□□ -0.76
NEDD4-203ENST00000502612 OXCT2Q9BYC2 517 aaPredicted RBP10.31□□□□□ -0.76
NEDD4-203ENST00000502612 PBX4Q9BYU1 374 aa10.31□□□□□ -0.76
NEDD4-203ENST00000502612 NXPE3Q969Y0 559 aa10.3□□□□□ -0.76
NEDD4-203ENST00000502612 PLD4Q96BZ4 506 aa10.3□□□□□ -0.76
NEDD4-203ENST00000502612 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
NEDD4-203ENST00000502612 SMG9Q9H0W8 520 aaKnown RBP10.3□□□□□ -0.76
NEDD4-203ENST00000502612 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
NEDD4-203ENST00000502612 TMEM238LA0A1B0GVL6 79 aa10.29□□□□□ -0.76
NEDD4-203ENST00000502612 PDE2AO00408 941 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-203ENST00000502612 SCAMP3O14828 347 aaKnown RBP10.29□□□□□ -0.76
NEDD4-203ENST00000502612 ADAMTS2O95450 1211 aa10.29□□□□□ -0.76
NEDD4-203ENST00000502612 FANCCQ00597 558 aa10.29□□□□□ -0.76
NEDD4-203ENST00000502612 SRSF11Q05519 484 aaKnown RBP10.29□□□□□ -0.76
NEDD4-203ENST00000502612 CEP135Q66GS9 1140 aa10.29□□□□□ -0.76
NEDD4-203ENST00000502612 TMEM102Q8N9M5 508 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-203ENST00000502612 ASAP3Q8TDY4 903 aa10.29□□□□□ -0.76
NEDD4-203ENST00000502612 POP1Q99575 1024 aaKnown RBP10.29□□□□□ -0.76
NEDD4-203ENST00000502612 SRCIN1Q9C0H9 1055 aa10.29□□□□□ -0.76
NEDD4-203ENST00000502612 BHLHE41Q9C0J9 482 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-203ENST00000502612 ELOA3CA0A087WX78 387 aaPredicted RBP10.28□□□□□ -0.76
NEDD4-203ENST00000502612 ELOA3DA6NLF2 546 aaPredicted RBP10.28□□□□□ -0.76
NEDD4-203ENST00000502612 ELOA3BQ3SY89 546 aa10.28□□□□□ -0.76
NEDD4-203ENST00000502612 SLCO4C1Q6ZQN7 724 aa10.28□□□□□ -0.76
NEDD4-203ENST00000502612 ELOA3Q8NG57 546 aa10.28□□□□□ -0.76
NEDD4-203ENST00000502612 TRIM33Q9UPN9 1127 aa10.28□□□□□ -0.76
NEDD4-203ENST00000502612 STARD13Q9Y3M8 1113 aa10.28□□□□□ -0.76
NEDD4-203ENST00000502612 FBXO24O75426 580 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 EPXP11678 715 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 GSTT1P30711 240 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 GMPRP36959 345 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 PCSK7Q16549 785 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 PSAPL1Q6NUJ1 521 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 ELMSAN1Q6PJG2 1045 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 GOLGA6L1Q8N7Z2 621 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
NEDD4-203ENST00000502612 ITGAEP38570 1179 aa10.26□□□□□ -0.77
NEDD4-203ENST00000502612 DTHD1Q6ZMT9 781 aa10.26□□□□□ -0.77
NEDD4-203ENST00000502612 METTL16Q86W50 562 aaKnown RBP10.26□□□□□ -0.77
NEDD4-203ENST00000502612 MUC3BQ9H195 1237 aa10.26□□□□□ -0.77
NEDD4-203ENST00000502612 RBSNQ9H1K0 784 aa10.26□□□□□ -0.77
NEDD4-203ENST00000502612 AKAP2Q9Y2D5 859 aa10.26□□□□□ -0.77
NEDD4-203ENST00000502612 A0A096LPE4 126 aa10.25□□□□□ -0.77
NEDD4-203ENST00000502612 A0A1W2PPZ6 126 aa10.25□□□□□ -0.77
NEDD4-203ENST00000502612 ZNF76P36508 570 aa10.25□□□□□ -0.77
NEDD4-203ENST00000502612 MICALL1Q8N3F8 863 aa10.25□□□□□ -0.77
NEDD4-203ENST00000502612 LACRTQ9GZZ8 138 aa10.25□□□□□ -0.77
NEDD4-203ENST00000502612 GDF2Q9UK05 429 aaPredicted RBP10.25□□□□□ -0.77
NEDD4-203ENST00000502612 TTF2Q9UNY4 1162 aaKnown RBP10.25□□□□□ -0.77
NEDD4-203ENST00000502612 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
NEDD4-203ENST00000502612 SMNDC1O75940 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEDD4-203ENST00000502612 ALBP02768 609 aa10.24□□□□□ -0.77
NEDD4-203ENST00000502612 TAF1CQ15572 869 aaPredicted RBP10.24□□□□□ -0.77
NEDD4-203ENST00000502612 C8orf86Q6ZUL3 223 aa10.24□□□□□ -0.77
NEDD4-203ENST00000502612 SHISA8B8ZZ34 492 aa10.23□□□□□ -0.77
NEDD4-203ENST00000502612 ITPKAP23677 461 aa10.23□□□□□ -0.77
NEDD4-203ENST00000502612 GDF6Q6KF10 455 aaPredicted RBP10.23□□□□□ -0.77
NEDD4-203ENST00000502612 WHAMMQ8TF30 809 aa10.23□□□□□ -0.77
NEDD4-203ENST00000502612 RNF34Q969K3 372 aa10.23□□□□□ -0.77
NEDD4-203ENST00000502612 ZNF775Q96BV0 537 aaPredicted RBP10.23□□□□□ -0.77
NEDD4-203ENST00000502612 TRIM56Q9BRZ2 755 aaKnown RBP10.23□□□□□ -0.77
NEDD4-203ENST00000502612 ZNF576Q9H609 170 aa10.23□□□□□ -0.77
NEDD4-203ENST00000502612 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
NEDD4-203ENST00000502612 MAP3K10Q02779 954 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 RAD51AP2Q09MP3 1159 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 FAAP100Q0VG06 881 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 GRIK5Q16478 980 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 TPTE2Q6XPS3 522 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 NT5DC4Q86YG4 428 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 JPH1Q9HDC5 661 aaPredicted RBP10.22□□□□□ -0.77
NEDD4-203ENST00000502612 SH2B1Q9NRF2 756 aaPredicted RBP10.22□□□□□ -0.77
NEDD4-203ENST00000502612 METTL5Q9NRN9 209 aaKnown RBP10.22□□□□□ -0.77
NEDD4-203ENST00000502612 FRRS1LQ9P0K9 344 aa10.22□□□□□ -0.77
NEDD4-203ENST00000502612 F6X3S4 739 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 WFS1O76024 890 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 ALAS2P22557 587 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 ERCC5P28715 1186 aaPredicted RBP10.21□□□□□ -0.77
NEDD4-203ENST00000502612 LYPD4Q6UWN0 246 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 C20orf204Q6ZNR8 217 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 GALNT6Q8NCL4 622 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 EDARADDQ8WWZ3 215 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 PCDHGB7Q9Y5F8 929 aa10.21□□□□□ -0.77
NEDD4-203ENST00000502612 RGS9O75916 674 aaPredicted RBP10.2□□□□□ -0.78
NEDD4-203ENST00000502612 SLURP2P0DP57 97 aa10.2□□□□□ -0.78
NEDD4-203ENST00000502612 ST13P50502 369 aaKnown RBP10.2□□□□□ -0.78
NEDD4-203ENST00000502612 ZNF157P51786 506 aaPredicted RBP10.2□□□□□ -0.78
NEDD4-203ENST00000502612 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
NEDD4-203ENST00000502612 VN1R5Q7Z5H4 357 aa10.2□□□□□ -0.78
NEDD4-203ENST00000502612 BSNDQ8WZ55 320 aa10.2□□□□□ -0.78
NEDD4-203ENST00000502612 COPRSQ9NQ92 184 aa10.2□□□□□ -0.78
NEDD4-203ENST00000502612 SOX13Q9UN79 622 aa10.2□□□□□ -0.78
NEDD4-203ENST00000502612 OIP5O43482 229 aa10.19□□□□□ -0.78
NEDD4-203ENST00000502612 CELA3AP09093 270 aa10.19□□□□□ -0.78
NEDD4-203ENST00000502612 XRCC5P13010 732 aaKnown RBP10.19□□□□□ -0.78
NEDD4-203ENST00000502612 PTPRAP18433 802 aa10.19□□□□□ -0.78
NEDD4-203ENST00000502612 EPHA1P21709 976 aa10.19□□□□□ -0.78
NEDD4-203ENST00000502612 CDC25BP30305 580 aa10.19□□□□□ -0.78
NEDD4-203ENST00000502612 CHSY3Q70JA7 882 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms