RNA–Protein interactions for RNA: ENST00000502162.2

LINC00847-203, long intergenic non-protein coding RNA 847, humanhuman

TSL 1 (best)

Gene LINC00847, Length 1,809 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00847-203ENST00000502162 CHGBP05060 677 aa22.59■■□□□ 1.21
LINC00847-203ENST00000502162 DEKP35659 375 aaKnown RBP22.59■■□□□ 1.21
LINC00847-203ENST00000502162 MCAMP43121 646 aa22.59■■□□□ 1.21
LINC00847-203ENST00000502162 ZAP70P43403 619 aa22.59■■□□□ 1.21
LINC00847-203ENST00000502162 TTF1Q15361 905 aaPredicted RBP22.59■■□□□ 1.21
LINC00847-203ENST00000502162 ERFEQ4G0M1 354 aa22.59■■□□□ 1.21
LINC00847-203ENST00000502162 ZSCAN31Q96LW9 406 aaPredicted RBP22.59■■□□□ 1.21
LINC00847-203ENST00000502162 SH2B1Q9NRF2 756 aaPredicted RBP22.58■■□□□ 1.21
LINC00847-203ENST00000502162 GSE1Q14687 1217 aa22.57■■□□□ 1.2
LINC00847-203ENST00000502162 CCDC102BQ68D86 513 aa22.57■■□□□ 1.2
LINC00847-203ENST00000502162 BLOC1S2Q6QNY1 142 aa22.57■■□□□ 1.2
LINC00847-203ENST00000502162 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.57■■□□□ 1.2
LINC00847-203ENST00000502162 ZSCAN25Q6NSZ9 544 aa22.57■■□□□ 1.2
LINC00847-203ENST00000502162 SETDB2Q96T68 719 aa22.57■■□□□ 1.2
LINC00847-203ENST00000502162 BRWD3Q6RI45 1802 aa22.56■■□□□ 1.2
LINC00847-203ENST00000502162 CPA1P15085 419 aa22.56■■□□□ 1.2
LINC00847-203ENST00000502162 ANKRD1Q15327 319 aa22.56■■□□□ 1.2
LINC00847-203ENST00000502162 APPBP2Q92624 585 aa22.56■■□□□ 1.2
LINC00847-203ENST00000502162 SRP68Q9UHB9 627 aaKnown RBP22.56■■□□□ 1.2
LINC00847-203ENST00000502162 RPS6KB1P23443 525 aa22.55■■□□□ 1.2
LINC00847-203ENST00000502162 FAM196AQ6ZSG2 479 aa22.55■■□□□ 1.2
LINC00847-203ENST00000502162 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
LINC00847-203ENST00000502162 ADRA2BP18089 450 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 PHKA1P46020 1223 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 HELBQ8NG08 1087 aaPredicted RBP22.54■■□□□ 1.2
LINC00847-203ENST00000502162 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.54■■□□□ 1.2
LINC00847-203ENST00000502162 DOCK2Q92608 1830 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 GOLGA6L22H0YM25 854 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 GTF2E1P29083 439 aaPredicted RBP22.54■■□□□ 1.2
LINC00847-203ENST00000502162 BICDL1Q6ZP65 573 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 ANKRD18AQ8IVF6 992 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 OSBP2Q969R2 916 aa22.54■■□□□ 1.2
LINC00847-203ENST00000502162 M0R2C6 588 aa22.53■■□□□ 1.2
LINC00847-203ENST00000502162 BAG4O95429 457 aaKnown RBP22.53■■□□□ 1.2
LINC00847-203ENST00000502162 CYP21A2P08686 494 aa22.53■■□□□ 1.2
LINC00847-203ENST00000502162 HSPD1P10809 573 aaKnown RBP22.53■■□□□ 1.2
LINC00847-203ENST00000502162 PI16Q6UXB8 463 aa22.53■■□□□ 1.2
LINC00847-203ENST00000502162 UBR3Q6ZT12 1888 aa22.53■■□□□ 1.2
LINC00847-203ENST00000502162 COL4A1P02462 1669 aa22.53■■□□□ 1.2
LINC00847-203ENST00000502162 CHRNDQ07001 517 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 PKP1Q13835 747 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 TRAPPC3LQ5T215 181 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 NBPF5PQ86XG9 351 aaPredicted RBP22.52■■□□□ 1.2
LINC00847-203ENST00000502162 TAF6LQ9Y6J9 622 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 SLFNL1Q499Z3 407 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 SLC27A3Q5K4L6 730 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 TPTE2Q6XPS3 522 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 SMIM5Q71RC9 77 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 KRT27Q7Z3Y8 459 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 NEK1Q96PY6 1258 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 BSDC1Q9NW68 430 aaPredicted RBP22.52■■□□□ 1.2
LINC00847-203ENST00000502162 ZDHHC9Q9Y397 364 aa22.52■■□□□ 1.2
LINC00847-203ENST00000502162 BRD1O95696 1058 aa22.51■■□□□ 1.19
LINC00847-203ENST00000502162 HMGB1P09429 215 aaKnown RBP22.51■■□□□ 1.19
LINC00847-203ENST00000502162 HMGB2P26583 209 aaKnown RBP22.51■■□□□ 1.19
LINC00847-203ENST00000502162 RFC4P35249 363 aa22.51■■□□□ 1.19
LINC00847-203ENST00000502162 ADD2P35612 726 aa22.51■■□□□ 1.19
LINC00847-203ENST00000502162 WASHC4Q2M389 1173 aa22.51■■□□□ 1.19
LINC00847-203ENST00000502162 C3orf67Q6ZVT6 689 aa22.51■■□□□ 1.19
LINC00847-203ENST00000502162 TRAK2O60296 914 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 UBE3CQ15386 1083 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 SKOR2Q2VWA4 1001 aaPredicted RBP22.5■■□□□ 1.19
LINC00847-203ENST00000502162 AMIGO3Q86WK7 504 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 NLRP3Q96P20 1036 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 LAMA4Q16363 1823 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 SPATA5Q8NB90 893 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 CTNNA3Q9UI47 895 aa22.5■■□□□ 1.19
LINC00847-203ENST00000502162 CARMIL3Q8ND23 1372 aa22.49■■□□□ 1.19
LINC00847-203ENST00000502162 PIH1D3Q9NQM4 214 aaKnown RBP22.49■■□□□ 1.19
LINC00847-203ENST00000502162 LRRC4BQ9NT99 713 aa22.49■■□□□ 1.19
LINC00847-203ENST00000502162 MYO5AQ9Y4I1 1855 aaKnown RBP22.49■■□□□ 1.19
LINC00847-203ENST00000502162 LARGE1O95461 756 aa22.48■■□□□ 1.19
LINC00847-203ENST00000502162 UBE4AQ14139 1066 aa22.48■■□□□ 1.19
LINC00847-203ENST00000502162 RASGRF1Q13972 1273 aa22.47■■□□□ 1.19
LINC00847-203ENST00000502162 TOB2Q14106 344 aaPredicted RBP22.47■■□□□ 1.19
LINC00847-203ENST00000502162 ME3Q16798 604 aa22.47■■□□□ 1.19
LINC00847-203ENST00000502162 SLC9C2Q5TAH2 1124 aa22.47■■□□□ 1.19
LINC00847-203ENST00000502162 PUS7LQ9H0K6 701 aaKnown RBP22.47■■□□□ 1.19
LINC00847-203ENST00000502162 TPCN1Q9ULQ1 816 aa22.47■■□□□ 1.19
LINC00847-203ENST00000502162 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
LINC00847-203ENST00000502162 WDR33Q9C0J8 1336 aaKnown RBP22.47■■□□□ 1.19
LINC00847-203ENST00000502162 TAF1P21675 1872 aa22.47■■□□□ 1.19
LINC00847-203ENST00000502162 GPAA1O43292 621 aa22.46■■□□□ 1.19
LINC00847-203ENST00000502162 IDH1O75874 414 aaKnown RBP22.45■■□□□ 1.19
LINC00847-203ENST00000502162 PHF14O94880 888 aa22.45■■□□□ 1.19
LINC00847-203ENST00000502162 PDE6AP16499 860 aa22.45■■□□□ 1.19
LINC00847-203ENST00000502162 STOX1Q6ZVD7 989 aa22.45■■□□□ 1.19
LINC00847-203ENST00000502162 CCDC83Q8IWF9 413 aa22.45■■□□□ 1.19
LINC00847-203ENST00000502162 LARP6Q9BRS8 491 aaKnown RBP22.45■■□□□ 1.19
LINC00847-203ENST00000502162 ZNF804BA4D1E1 1349 aa22.45■■□□□ 1.19
LINC00847-203ENST00000502162 TNRC6CQ9HCJ0 1690 aaKnown RBP22.45■■□□□ 1.18
LINC00847-203ENST00000502162 FOXP2O15409 715 aa22.45■■□□□ 1.18
LINC00847-203ENST00000502162 COL9A3Q14050 684 aaPredicted RBP22.45■■□□□ 1.18
LINC00847-203ENST00000502162 SNAP23O00161 211 aa22.44■■□□□ 1.18
LINC00847-203ENST00000502162 PDIA4P13667 645 aaKnown RBP22.44■■□□□ 1.18
LINC00847-203ENST00000502162 MAP3K12Q12852 859 aa22.44■■□□□ 1.18
LINC00847-203ENST00000502162 ZNF772Q68DY9 489 aaPredicted RBP22.44■■□□□ 1.18
LINC00847-203ENST00000502162 CELF1Q92879 486 aaKnown RBP22.44■■□□□ 1.18
LINC00847-203ENST00000502162 MINPP1Q9UNW1 487 aa22.44■■□□□ 1.18
LINC00847-203ENST00000502162 ZNF532Q9HCE3 1301 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms