RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 STX6O43752 255 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 AK2P54819 239 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
NEAT1-201ENST00000499732 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
NEAT1-201ENST00000499732 F13A1P00488 732 aa17.27■□□□□ 0.36
NEAT1-201ENST00000499732 ADRA2BP18089 450 aa17.27■□□□□ 0.36
NEAT1-201ENST00000499732 FAM89AQ96GI7 184 aa17.27■□□□□ 0.36
NEAT1-201ENST00000499732 UBR3Q6ZT12 1888 aa17.27■□□□□ 0.35
NEAT1-201ENST00000499732 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 TFCP2Q12800 502 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 AMIGO3Q86WK7 504 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 RUFY2Q8WXA3 655 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 ZPR1O75312 459 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 SYT1P21579 422 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 TNNI3KQ59H18 835 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
NEAT1-201ENST00000499732 TRMT112Q9UI30 125 aaKnown RBP17.26■□□□□ 0.35
NEAT1-201ENST00000499732 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 FPGT-TNNI3KV9GXZ4 949 aa17.26■□□□□ 0.35
NEAT1-201ENST00000499732 RUFY3Q7L099 469 aa17.25■□□□□ 0.35
NEAT1-201ENST00000499732 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
NEAT1-201ENST00000499732 TM6SF1Q9BZW5 370 aa17.25■□□□□ 0.35
NEAT1-201ENST00000499732 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
NEAT1-201ENST00000499732 CSF1RP07333 972 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 PDIA4P13667 645 aaKnown RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 KCNB2Q92953 911 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 RFC4P35249 363 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 FOXD4L6Q3SYB3 417 aaPredicted RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 FOXD4L3Q6VB84 417 aaPredicted RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 PRIMPOLQ96LW4 560 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 ZMYND15Q9H091 742 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
NEAT1-201ENST00000499732 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
NEAT1-201ENST00000499732 EYA2O00167 538 aa17.23■□□□□ 0.35
NEAT1-201ENST00000499732 CIAO1O76071 339 aa17.23■□□□□ 0.35
NEAT1-201ENST00000499732 IL15P40933 162 aaPredicted RBP17.23■□□□□ 0.35
NEAT1-201ENST00000499732 RBM10P98175 930 aaKnown RBP17.23■□□□□ 0.35
NEAT1-201ENST00000499732 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
NEAT1-201ENST00000499732 USPL1Q5W0Q7 1092 aa17.23■□□□□ 0.35
NEAT1-201ENST00000499732 FAM13BQ9NYF5 915 aa17.23■□□□□ 0.35
NEAT1-201ENST00000499732 USP25Q9UHP3 1055 aa17.23■□□□□ 0.35
NEAT1-201ENST00000499732 SH3TC1Q8TE82 1336 aa17.22■□□□□ 0.35
NEAT1-201ENST00000499732 HSP90B1P14625 803 aaKnown RBP17.22■□□□□ 0.35
NEAT1-201ENST00000499732 GPR162Q16538 588 aa17.22■□□□□ 0.35
NEAT1-201ENST00000499732 LRRC24Q50LG9 513 aa17.22■□□□□ 0.35
NEAT1-201ENST00000499732 FUCA2Q9BTY2 467 aa17.22■□□□□ 0.35
NEAT1-201ENST00000499732 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
NEAT1-201ENST00000499732 SRP68Q9UHB9 627 aaKnown RBP17.22■□□□□ 0.35
NEAT1-201ENST00000499732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
NEAT1-201ENST00000499732 IRS4O14654 1257 aaPredicted RBP17.21■□□□□ 0.35
NEAT1-201ENST00000499732 ADCY5O95622 1261 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.35
NEAT1-201ENST00000499732 HMGN5P82970 282 aaKnown RBP17.21■□□□□ 0.35
NEAT1-201ENST00000499732 CWC27Q6UX04 472 aaKnown RBP17.21■□□□□ 0.35
NEAT1-201ENST00000499732 MYRIPQ8NFW9 859 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 LAMB2P55268 1798 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 ZNF609O15014 1411 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 PDE8AO60658 829 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
NEAT1-201ENST00000499732 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
NEAT1-201ENST00000499732 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.34
NEAT1-201ENST00000499732 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.34
NEAT1-201ENST00000499732 KDM4AO75164 1064 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 NTSR2O95665 410 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
NEAT1-201ENST00000499732 CTSWP56202 376 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
NEAT1-201ENST00000499732 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
NEAT1-201ENST00000499732 FIBPO43427 364 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 TPM3P06753 285 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 ATP5JP18859 108 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 GJB2P29033 226 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
NEAT1-201ENST00000499732 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 SPTLC3Q9NUV7 552 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 CYP46A1Q9Y6A2 500 aa17.19■□□□□ 0.34
NEAT1-201ENST00000499732 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.344e-60■■■□□ 17.4
NEAT1-201ENST00000499732 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
NEAT1-201ENST00000499732 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms