RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
PARP1-209ENST00000498787 SEMA3EO15041 775 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 TAF5LO75529 589 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 ZAP70P43403 619 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 NEK4P51957 841 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
PARP1-209ENST00000498787 C3orf67Q6ZVT6 689 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 EDC3Q96F86 508 aaKnown RBP17.43■□□□□ 0.38
PARP1-209ENST00000498787 DSCC1Q9BVC3 393 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
PARP1-209ENST00000498787 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
PARP1-209ENST00000498787 MCAMP43121 646 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 PHKA1P46020 1223 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 NECTIN1Q15223 517 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 VPS37DQ86XT2 251 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 SPATA5Q8NB90 893 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 APPBP2Q92624 585 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
PARP1-209ENST00000498787 IL25Q9H293 177 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
PARP1-209ENST00000498787 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
PARP1-209ENST00000498787 RBM8AQ9Y5S9 174 aaKnown RBP17.42■□□□□ 0.38
PARP1-209ENST00000498787 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
PARP1-209ENST00000498787 BBOX1O75936 387 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 BAG6P46379 1132 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 PTH1RQ03431 593 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 UBE3CQ15386 1083 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 TSGA10IPQ3SY00 556 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 LEMD3Q9Y2U8 911 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
PARP1-209ENST00000498787 ZNF827Q17R98 1081 aa17.4■□□□□ 0.38
PARP1-209ENST00000498787 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
PARP1-209ENST00000498787 CREB3L3Q68CJ9 461 aa17.4■□□□□ 0.38
PARP1-209ENST00000498787 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
PARP1-209ENST00000498787 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
PARP1-209ENST00000498787 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
PARP1-209ENST00000498787 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
PARP1-209ENST00000498787 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
PARP1-209ENST00000498787 KLRG2A4D1S0 409 aaPredicted RBP17.39■□□□□ 0.37
PARP1-209ENST00000498787 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
PARP1-209ENST00000498787 COL23A1Q86Y22 540 aaPredicted RBP17.39■□□□□ 0.37
PARP1-209ENST00000498787 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
PARP1-209ENST00000498787 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.37
PARP1-209ENST00000498787 PALD1Q9ULE6 856 aa17.39■□□□□ 0.37
PARP1-209ENST00000498787 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
PARP1-209ENST00000498787 NDUFB9Q9Y6M9 179 aa17.39■□□□□ 0.37
PARP1-209ENST00000498787 ZNF804BA4D1E1 1349 aa17.39■□□□□ 0.37
PARP1-209ENST00000498787 PDS5AQ29RF7 1337 aaKnown RBP17.39■□□□□ 0.37
PARP1-209ENST00000498787 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
PARP1-209ENST00000498787 PDE6BP35913 854 aa17.38■□□□□ 0.37
PARP1-209ENST00000498787 SCARF1Q14162 830 aa17.38■□□□□ 0.37
PARP1-209ENST00000498787 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
PARP1-209ENST00000498787 SLC27A2O14975 620 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 HMGB1P09429 215 aaKnown RBP17.37■□□□□ 0.37
PARP1-209ENST00000498787 ADD2P35612 726 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 BCAMP50895 628 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 SLC9C2Q5TAH2 1124 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
PARP1-209ENST00000498787 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
PARP1-209ENST00000498787 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 XDHP47989 1333 aa17.37■□□□□ 0.37
PARP1-209ENST00000498787 IDH1O75874 414 aaKnown RBP17.36■□□□□ 0.37
PARP1-209ENST00000498787 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
PARP1-209ENST00000498787 DDR1Q08345 913 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 RASGRF1Q13972 1273 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 SLC15A2Q16348 729 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 FBXO33Q7Z6M2 555 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 CCDC125Q86Z20 511 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
PARP1-209ENST00000498787 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
PARP1-209ENST00000498787 ZSWIM6Q9HCJ5 1215 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 ANKIB1Q9P2G1 1089 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 MAST3O60307 1309 aa17.36■□□□□ 0.37
PARP1-209ENST00000498787 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
PARP1-209ENST00000498787 ALDH1B1P30837 517 aa17.35■□□□□ 0.37
PARP1-209ENST00000498787 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
PARP1-209ENST00000498787 RASEFQ8IZ41 740 aa17.35■□□□□ 0.37
PARP1-209ENST00000498787 CCDC24Q8N4L8 307 aa17.35■□□□□ 0.37
PARP1-209ENST00000498787 INTS4Q96HW7 963 aaKnown RBP17.35■□□□□ 0.37
PARP1-209ENST00000498787 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
PARP1-209ENST00000498787 ALDH8A1Q9H2A2 487 aaPredicted RBP17.35■□□□□ 0.37
PARP1-209ENST00000498787 PNPLA7Q6ZV29 1317 aa17.35■□□□□ 0.37
PARP1-209ENST00000498787 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
PARP1-209ENST00000498787 NPR1P16066 1061 aa17.34■□□□□ 0.37
PARP1-209ENST00000498787 PDE6AP16499 860 aa17.34■□□□□ 0.37
PARP1-209ENST00000498787 GNAT2P19087 354 aa17.34■□□□□ 0.37
PARP1-209ENST00000498787 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
PARP1-209ENST00000498787 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
PARP1-209ENST00000498787 RUFY3Q7L099 469 aa17.34■□□□□ 0.37
PARP1-209ENST00000498787 ZGPATQ8N5A5 531 aaKnown RBP17.34■□□□□ 0.37
PARP1-209ENST00000498787 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
PARP1-209ENST00000498787 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms