RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TET3O43151 1660 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 NKTRP30414 1462 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 TXLNAP40222 546 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 NEUROD1Q13562 356 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 TRAPPC3LQ5T215 181 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 LRRC69Q6ZNQ3 347 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 GOLGA2P5Q9HBQ8 144 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 USP21Q9UK80 565 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 KDM5AP29375 1690 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-208ENST00000498325 ADH7P40394 386 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 ADGRE1Q14246 886 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 MBTPS1Q14703 1052 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 PLPP7Q8NBV4 271 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 SIN3AQ96ST3 1273 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 NEUROD4Q9HD90 331 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 TRPC5Q9UL62 973 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 TMEM2Q9UHN6 1383 aa7.56□□□□□ -1.2
HMGXB4-208ENST00000498325 ATRNO75882 1429 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 C1QTNF8P60827 252 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 SFSWAPQ12872 951 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 PRM3Q9NNZ6 103 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 DUOX2Q9NRD8 1548 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 NUP155O75694 1391 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 PNPLA6Q8IY17 1366 aa7.55□□□□□ -1.2
HMGXB4-208ENST00000498325 ELNP15502 786 aa7.54□□□□□ -1.2
HMGXB4-208ENST00000498325 SELPP16109 830 aa7.54□□□□□ -1.2
HMGXB4-208ENST00000498325 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-208ENST00000498325 TONSLQ96HA7 1378 aa7.54□□□□□ -1.2
HMGXB4-208ENST00000498325 ERBINQ96RT1 1412 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 BACH1O14867 736 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 LILRB5O75023 590 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 SPEM2Q0P670 501 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 IRF5Q13568 498 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 R3HDM1Q15032 1099 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 C20orf204Q6ZNR8 217 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 FNBP4Q8N3X1 1017 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 L3MBTL2Q969R5 705 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 TP53INP1Q96A56 240 aa7.53□□□□□ -1.2
HMGXB4-208ENST00000498325 RAC1P63000 192 aa7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 TEAD4Q15561 434 aa7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 NEUROD2Q15784 382 aa7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 LRRC59Q96AG4 307 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 LENG1Q96BZ8 264 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 SCHIP1Q9P0W5 487 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-208ENST00000498325 A0A0A0MRY4 1105 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 EML1O00423 815 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 PPP1R15AO75807 674 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 ATF3P18847 181 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 NOS2P35228 1153 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 VAC14Q08AM6 782 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 C14orf37Q86TY3 774 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 C7orf43Q8WVR3 580 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 C19orf44Q9H6X5 657 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 PCDHGA11Q9Y5H2 935 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 GPC6Q9Y625 555 aaPredicted RBP7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 ASXL1Q8IXJ9 1541 aa7.51□□□□□ -1.21
HMGXB4-208ENST00000498325 KANK1Q14678 1352 aa7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 ANKRD30BQ9BXX2 1392 aa7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 SHISA2Q6UWI4 295 aa7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 ZNF232Q9UNY5 417 aa7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 NCOA3Q9Y6Q9 1424 aa7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 UNC13BO14795 1591 aa7.5□□□□□ -1.21
HMGXB4-208ENST00000498325 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.49□□□□□ -1.21
HMGXB4-208ENST00000498325 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
HMGXB4-208ENST00000498325 PIK3C2BO00750 1634 aa7.49□□□□□ -1.21
HMGXB4-208ENST00000498325 MROH1Q8NDA8 1641 aa7.49□□□□□ -1.21
HMGXB4-208ENST00000498325 RHPN1Q8TCX5 695 aa7.48□□□□□ -1.21
HMGXB4-208ENST00000498325 CEP63Q96MT8 703 aa7.48□□□□□ -1.21
HMGXB4-208ENST00000498325 BRD7Q9NPI1 651 aa7.48□□□□□ -1.21
HMGXB4-208ENST00000498325 EIF2AK4Q9P2K8 1649 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-208ENST00000498325 RPRD2Q5VT52 1461 aaKnown RBP7.48□□□□□ -1.21
HMGXB4-208ENST00000498325 TBC1D8BQ0IIM8 1120 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 SEMA3FQ13275 785 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 IDI1Q13907 227 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 JPH1Q9HDC5 661 aaPredicted RBP7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 IQGAP3Q86VI3 1631 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 EFCAB6Q5THR3 1501 aa7.47□□□□□ -1.21
HMGXB4-208ENST00000498325 MST1RQ04912 1400 aa7.46□□□□□ -1.21
HMGXB4-208ENST00000498325 SERTM1A2A2V5 107 aa7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 PSME1Q06323 249 aa7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 BHMTQ93088 406 aa7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 RNF112Q9ULX5 631 aa7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 KCNH4Q9UQ05 1017 aa7.46□□□□□ -1.22
HMGXB4-208ENST00000498325 PTCH1Q13635 1447 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 KCNQ4P56696 695 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 EML3Q32P44 896 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 TBCELQ5QJ74 424 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms