RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 NOL7Q9UMY1 257 aaKnown RBP14.83□□□□□ -0.04
AFF3-215ENST00000498090 DDX60Q8IY21 1712 aaKnown RBP14.83□□□□□ -0.04
AFF3-215ENST00000498090 LAMB2P55268 1798 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
AFF3-215ENST00000498090 NECTIN1Q15223 517 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 NOL8Q76FK4 1167 aaKnown RBP14.82□□□□□ -0.04
AFF3-215ENST00000498090 RUFY3Q7L099 469 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 TICAM2Q86XR7 235 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 PDRG1Q9NUG6 133 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 CCDC39Q9UFE4 941 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 CCDC171Q6TFL3 1326 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 RFX7Q2KHR2 1363 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 CARMIL3Q8ND23 1372 aa14.82□□□□□ -0.04
AFF3-215ENST00000498090 TPM2P07951 284 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 HCLS1P14317 486 aaPredicted RBP14.81□□□□□ -0.04
AFF3-215ENST00000498090 TM4SF1P30408 202 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 UBE2HP62256 183 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 DDR1Q08345 913 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 ERFEQ4G0M1 354 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.81□□□□□ -0.04
AFF3-215ENST00000498090 USP48Q86UV5 1035 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 HMG20BQ9P0W2 317 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
AFF3-215ENST00000498090 CCDC183Q5T5S1 534 aa14.81□□□□□ -0.04
AFF3-215ENST00000498090 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
AFF3-215ENST00000498090 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
AFF3-215ENST00000498090 ZNF500O60304 480 aaPredicted RBP14.8□□□□□ -0.04
AFF3-215ENST00000498090 F13A1P00488 732 aa14.8□□□□□ -0.04
AFF3-215ENST00000498090 CSF1RP07333 972 aa14.8□□□□□ -0.04
AFF3-215ENST00000498090 SYT1P21579 422 aa14.8□□□□□ -0.04
AFF3-215ENST00000498090 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
AFF3-215ENST00000498090 CTSWP56202 376 aa14.8□□□□□ -0.04
AFF3-215ENST00000498090 C3orf67Q6ZVT6 689 aa14.8□□□□□ -0.04
AFF3-215ENST00000498090 NBPF5PQ86XG9 351 aaPredicted RBP14.8□□□□□ -0.04
AFF3-215ENST00000498090 JAKMIP1Q96N16 626 aaKnown RBP14.8□□□□□ -0.04
AFF3-215ENST00000498090 PA2G4Q9UQ80 394 aaKnown RBP14.8□□□□□ -0.04
AFF3-215ENST00000498090 POLRMTO00411 1230 aaKnown RBP14.79□□□□□ -0.04
AFF3-215ENST00000498090 PDE8AO60658 829 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 SASH1O94885 1247 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 PDCP20941 246 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 TSGA10IPQ3SY00 556 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 PRPF40BQ6NWY9 871 aaKnown RBP14.79□□□□□ -0.04
AFF3-215ENST00000498090 CCDC24Q8N4L8 307 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 KLHDC4Q8TBB5 520 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 NYXQ9GZU5 481 aa14.79□□□□□ -0.04
AFF3-215ENST00000498090 NSFL1CQ9UNZ2 370 aaKnown RBP14.79□□□□□ -0.04
AFF3-215ENST00000498090 TNRC6CQ9HCJ0 1690 aaKnown RBP14.79□□□□□ -0.04
AFF3-215ENST00000498090 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
AFF3-215ENST00000498090 OFD1O75665 1012 aa14.78□□□□□ -0.04
AFF3-215ENST00000498090 TTLL11Q8NHH1 800 aa14.78□□□□□ -0.04
AFF3-215ENST00000498090 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
AFF3-215ENST00000498090 CCDC85AQ96PX6 553 aaPredicted RBP14.78□□□□□ -0.04
AFF3-215ENST00000498090 COPRSQ9NQ92 184 aa14.78□□□□□ -0.04
AFF3-215ENST00000498090 CHMP3Q9Y3E7 222 aa14.78□□□□□ -0.04
AFF3-215ENST00000498090 KCNJ4P48050 445 aa14.77□□□□□ -0.04
AFF3-215ENST00000498090 PTH1RQ03431 593 aa14.77□□□□□ -0.04
AFF3-215ENST00000498090 PTPN12Q05209 780 aaKnown RBP14.77□□□□□ -0.04
AFF3-215ENST00000498090 KRT32Q14532 448 aa14.77□□□□□ -0.04
AFF3-215ENST00000498090 CREB3L3Q68CJ9 461 aa14.77□□□□□ -0.04
AFF3-215ENST00000498090 PRR5LQ6MZQ0 368 aa14.77□□□□□ -0.04
AFF3-215ENST00000498090 RBM8AQ9Y5S9 174 aaKnown RBP14.77□□□□□ -0.04
AFF3-215ENST00000498090 NRXN2Q9P2S2 1712 aa14.77□□□□□ -0.05
AFF3-215ENST00000498090 SERPINB2P05120 415 aa14.77□□□□□ -0.05
AFF3-215ENST00000498090 SLC10A5Q5PT55 438 aa14.77□□□□□ -0.05
AFF3-215ENST00000498090 NLGN1Q8N2Q7 840 aa14.77□□□□□ -0.05
AFF3-215ENST00000498090 GREM2Q9H772 168 aa14.77□□□□□ -0.05
AFF3-215ENST00000498090 ZKSCAN5Q9Y2L8 839 aa14.77□□□□□ -0.05
AFF3-215ENST00000498090 LRP5O75197 1615 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 COL4A1P02462 1669 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 GJB2P29033 226 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 TPTE2Q6XPS3 522 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 FSD1Q9BTV5 496 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
AFF3-215ENST00000498090 ZBTB7AO95365 584 aa14.75□□□□□ -0.05
AFF3-215ENST00000498090 MMP10P09238 476 aa14.75□□□□□ -0.05
AFF3-215ENST00000498090 MYH3P11055 1940 aa14.75□□□□□ -0.05
AFF3-215ENST00000498090 ATP5JP18859 108 aa14.75□□□□□ -0.05
AFF3-215ENST00000498090 NMIQ13287 307 aaPredicted RBP14.75□□□□□ -0.05
AFF3-215ENST00000498090 RIC1Q4ADV7 1423 aa14.75□□□□□ -0.05
AFF3-215ENST00000498090 ZNF594Q96JF6 807 aaPredicted RBP14.75□□□□□ -0.05
AFF3-215ENST00000498090 RTL9Q8NET4 1388 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 SLC27A2O14975 620 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
AFF3-215ENST00000498090 PTGER2P43116 358 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 ADCK5Q3MIX3 580 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 BLOC1S2Q6QNY1 142 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 CCDC83Q8IWF9 413 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 CHAMP1Q96JM3 812 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 MTMR6Q9Y217 621 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 GADD45BO75293 160 aaPredicted RBP14.74□□□□□ -0.05
AFF3-215ENST00000498090 ITGA6P23229 1130 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
AFF3-215ENST00000498090 CCDC8Q9H0W5 538 aaPredicted RBP14.74□□□□□ -0.05
AFF3-215ENST00000498090 SIL1Q9H173 461 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms