RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 DNAAF4Q8WXU2 420 aa23.3■■□□□ 1.32
ATPAF2-209ENST00000497871 MYH16Q9H6N6 1097 aa23.3■■□□□ 1.32
ATPAF2-209ENST00000497871 LEMD3Q9Y2U8 911 aa23.3■■□□□ 1.32
ATPAF2-209ENST00000497871 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
ATPAF2-209ENST00000497871 CSF1RP07333 972 aa23.29■■□□□ 1.32
ATPAF2-209ENST00000497871 LINS1Q8NG48 757 aa23.29■■□□□ 1.32
ATPAF2-209ENST00000497871 CDCA5Q96FF9 252 aa23.29■■□□□ 1.32
ATPAF2-209ENST00000497871 COA1Q9GZY4 146 aa23.29■■□□□ 1.32
ATPAF2-209ENST00000497871 ANP32CO43423 234 aa23.28■■□□□ 1.32
ATPAF2-209ENST00000497871 ITGA6P23229 1130 aa23.28■■□□□ 1.32
ATPAF2-209ENST00000497871 ZNF157P51786 506 aaPredicted RBP23.28■■□□□ 1.32
ATPAF2-209ENST00000497871 CASP7P55210 303 aa23.28■■□□□ 1.32
ATPAF2-209ENST00000497871 ANKRD2Q9GZV1 360 aa23.28■■□□□ 1.32
ATPAF2-209ENST00000497871 DACT2Q5SW24 774 aa23.27■■□□□ 1.32
ATPAF2-209ENST00000497871 STRIP1Q5VSL9 837 aa23.27■■□□□ 1.32
ATPAF2-209ENST00000497871 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
ATPAF2-209ENST00000497871 PITPNM2Q9BZ72 1349 aa23.27■■□□□ 1.32
ATPAF2-209ENST00000497871 ZEB1P37275 1124 aaPredicted RBP23.26■■□□□ 1.31
ATPAF2-209ENST00000497871 KIF23Q02241 960 aaPredicted RBP23.26■■□□□ 1.31
ATPAF2-209ENST00000497871 MPHOSPH8Q99549 860 aa23.26■■□□□ 1.31
ATPAF2-209ENST00000497871 POLR2AP24928 1970 aaKnown RBP23.26■■□□□ 1.31
ATPAF2-209ENST00000497871 MMP14P50281 582 aa23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 FKBP1BP68106 108 aa23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 TXNRD3Q86VQ6 643 aa23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 OGFOD1Q8N543 542 aa23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 ZNF804BA4D1E1 1349 aa23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 MYO3BQ8WXR4 1341 aa23.25■■□□□ 1.31
ATPAF2-209ENST00000497871 FAM161AQ3B820 660 aa23.24■■□□□ 1.31
ATPAF2-209ENST00000497871 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
ATPAF2-209ENST00000497871 SAGE1Q9NXZ1 904 aa23.23■■□□□ 1.31
ATPAF2-209ENST00000497871 SLC10A3P09131 477 aa23.22■■□□□ 1.31
ATPAF2-209ENST00000497871 NBPF9Q3BBW0 867 aa23.22■■□□□ 1.31
ATPAF2-209ENST00000497871 TTLL5Q6EMB2 1281 aa23.22■■□□□ 1.31
ATPAF2-209ENST00000497871 FBXW7Q969H0 707 aa23.22■■□□□ 1.31
ATPAF2-209ENST00000497871 ANKRD18BA2A2Z9 1011 aa23.21■■□□□ 1.31
ATPAF2-209ENST00000497871 ZNF316A6NFI3 1004 aaPredicted RBP23.21■■□□□ 1.31
ATPAF2-209ENST00000497871 CCDC85CA6NKD9 419 aa23.21■■□□□ 1.31
ATPAF2-209ENST00000497871 REM2Q8IYK8 340 aaPredicted RBP23.21■■□□□ 1.31
ATPAF2-209ENST00000497871 MCOLN1Q9GZU1 580 aa23.21■■□□□ 1.31
ATPAF2-209ENST00000497871 WNT10BO00744 389 aa23.2■■□□□ 1.3
ATPAF2-209ENST00000497871 KCNJ4P48050 445 aa23.2■■□□□ 1.3
ATPAF2-209ENST00000497871 CHRNDQ07001 517 aa23.2■■□□□ 1.3
ATPAF2-209ENST00000497871 BEND3Q5T5X7 828 aa23.2■■□□□ 1.3
ATPAF2-209ENST00000497871 CSRNP1Q96S65 589 aa23.2■■□□□ 1.3
ATPAF2-209ENST00000497871 KLRK1P26718 216 aa23.19■■□□□ 1.3
ATPAF2-209ENST00000497871 FOXO4P98177 505 aa23.19■■□□□ 1.3
ATPAF2-209ENST00000497871 SPINK5Q9NQ38 1064 aaPredicted RBP23.19■■□□□ 1.3
ATPAF2-209ENST00000497871 RNF186Q9NXI6 227 aa23.19■■□□□ 1.3
ATPAF2-209ENST00000497871 PSME4Q14997 1843 aa23.19■■□□□ 1.3
ATPAF2-209ENST00000497871 MYH3P11055 1940 aa23.18■■□□□ 1.3
ATPAF2-209ENST00000497871 F6X3S4 739 aa23.18■■□□□ 1.3
ATPAF2-209ENST00000497871 IFIT5Q13325 482 aaKnown RBP23.18■■□□□ 1.3
ATPAF2-209ENST00000497871 SCAF8Q9UPN6 1271 aaKnown RBP23.18■■□□□ 1.3
ATPAF2-209ENST00000497871 TRPA1O75762 1119 aa23.17■■□□□ 1.3
ATPAF2-209ENST00000497871 GTF2IP78347 998 aa23.17■■□□□ 1.3
ATPAF2-209ENST00000497871 DGKZQ13574 1117 aa23.17■■□□□ 1.3
ATPAF2-209ENST00000497871 RASAL3Q86YV0 1011 aa23.17■■□□□ 1.3
ATPAF2-209ENST00000497871 CD209Q9NNX6 404 aa23.17■■□□□ 1.3
ATPAF2-209ENST00000497871 HDAC9Q9UKV0 1011 aa23.17■■□□□ 1.3
ATPAF2-209ENST00000497871 PRAMEF18Q5VWM3 479 aa23.16■■□□□ 1.3
ATPAF2-209ENST00000497871 C15orf52Q6ZUT6 534 aaKnown RBP23.16■■□□□ 1.3
ATPAF2-209ENST00000497871 TAF5LO75529 589 aa23.15■■□□□ 1.3
ATPAF2-209ENST00000497871 RGS19P49795 217 aa23.15■■□□□ 1.3
ATPAF2-209ENST00000497871 MOB2Q70IA6 237 aa23.15■■□□□ 1.3
ATPAF2-209ENST00000497871 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
ATPAF2-209ENST00000497871 UBE2Q2LH0YL09 131 aa23.14■■□□□ 1.29
ATPAF2-209ENST00000497871 NF2P35240 595 aa23.14■■□□□ 1.29
ATPAF2-209ENST00000497871 LMBR1LQ6UX01 489 aa23.14■■□□□ 1.29
ATPAF2-209ENST00000497871 CHMP3Q9Y3E7 222 aa23.14■■□□□ 1.29
ATPAF2-209ENST00000497871 CASP8AP2Q9UKL3 1982 aa23.14■■□□□ 1.29
ATPAF2-209ENST00000497871 IRS2Q9Y4H2 1338 aa23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 SNAP23O00161 211 aa23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 GRM8O00222 908 aa23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 SASH1O94885 1247 aa23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 HELBQ8NG08 1087 aaPredicted RBP23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 ZBED3Q96IU2 234 aaPredicted RBP23.13■■□□□ 1.29
ATPAF2-209ENST00000497871 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
ATPAF2-209ENST00000497871 TTLL12Q14166 644 aaPredicted RBP23.12■■□□□ 1.29
ATPAF2-209ENST00000497871 CCDC57Q2TAC2 916 aa23.12■■□□□ 1.29
ATPAF2-209ENST00000497871 APOBEC3FQ8IUX4 373 aaKnown RBP23.12■■□□□ 1.29
ATPAF2-209ENST00000497871 C9orf78Q9NZ63 289 aaPredicted RBP23.12■■□□□ 1.29
ATPAF2-209ENST00000497871 ALDH1L1O75891 902 aa23.11■■□□□ 1.29
ATPAF2-209ENST00000497871 EPHA10Q5JZY3 1008 aa23.11■■□□□ 1.29
ATPAF2-209ENST00000497871 LDHAL6AQ6ZMR3 332 aa23.11■■□□□ 1.29
ATPAF2-209ENST00000497871 PAPPA2Q9BXP8 1791 aa23.11■■□□□ 1.29
ATPAF2-209ENST00000497871 SPEF2Q9C093 1822 aa23.1■■□□□ 1.29
ATPAF2-209ENST00000497871 IL1R1P14778 569 aa23.1■■□□□ 1.29
ATPAF2-209ENST00000497871 ZNF804AQ7Z570 1209 aa23.1■■□□□ 1.29
ATPAF2-209ENST00000497871 MLLT1Q03111 559 aaPredicted RBP23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 DLGAP5Q15398 846 aa23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 CERS5Q8N5B7 392 aa23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 MTMR14Q8NCE2 650 aa23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 ZNF594Q96JF6 807 aaPredicted RBP23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
ATPAF2-209ENST00000497871 FKBP1AP62942 108 aaKnown RBP23.08■■□□□ 1.29
ATPAF2-209ENST00000497871 SLC4A10Q6U841 1118 aa23.08■■□□□ 1.29
ATPAF2-209ENST00000497871 ARMC9Q7Z3E5 817 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms