RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 POLLQ9UGP5 575 aa29.64■■■□□ 2.34
TNFRSF4-203ENST00000497869 IFIT1P09914 478 aaKnown RBP29.63■■■□□ 2.33
TNFRSF4-203ENST00000497869 TGFB2P61812 414 aa29.63■■■□□ 2.33
TNFRSF4-203ENST00000497869 PODXL2Q9NZ53 605 aa29.63■■■□□ 2.33
TNFRSF4-203ENST00000497869 GYG1P46976 350 aa29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 ZNF219Q9P2Y4 722 aaPredicted RBP29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 LTBP1Q14766 1721 aa29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 ARAP2Q8WZ64 1704 aa29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 ERC2O15083 957 aa29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 CD2APQ9Y5K6 639 aa29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 DLEC1Q9Y238 1755 aa29.62■■■□□ 2.33
TNFRSF4-203ENST00000497869 GORABQ5T7V8 394 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 PI16Q6UXB8 463 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 KLHL34Q8N239 644 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 TBC1D16Q8TBP0 767 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 FAM84BQ96KN1 310 aaPredicted RBP29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 WWC3Q9ULE0 1092 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 SNED1Q8TER0 1413 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 DUOX1Q9NRD9 1551 aa29.61■■■□□ 2.33
TNFRSF4-203ENST00000497869 LEMD3Q9Y2U8 911 aa29.6■■■□□ 2.33
TNFRSF4-203ENST00000497869 KCNJ4P48050 445 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 CCDC158Q5M9N0 1113 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 NLGN2Q8NFZ4 835 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 HAUS7Q99871 368 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 UFL1O94874 794 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 MCAMP43121 646 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 TTC39AQ5SRH9 613 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 TTLL6Q8N841 843 aa29.59■■■□□ 2.33
TNFRSF4-203ENST00000497869 FBXO33Q7Z6M2 555 aa29.58■■■□□ 2.33
TNFRSF4-203ENST00000497869 SNRKQ9NRH2 765 aa29.58■■■□□ 2.33
TNFRSF4-203ENST00000497869 GGA1Q9UJY5 639 aa29.58■■■□□ 2.33
TNFRSF4-203ENST00000497869 CACNA1SQ13698 1873 aa29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 TRIM6-TRIM34B2RNG4 842 aa29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 ATP2B4P23634 1241 aa29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 ARID4AP29374 1257 aaPredicted RBP29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 ZNF512BQ96KM6 892 aaPredicted RBP29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 SOCS7O14512 581 aa29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 C21orf2O43822 256 aa29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 RILPL2Q969X0 211 aa29.57■■■□□ 2.32
TNFRSF4-203ENST00000497869 MPNDQ8N594 471 aa29.56■■■□□ 2.32
TNFRSF4-203ENST00000497869 DNAJC2Q99543 621 aaKnown RBP29.56■■■□□ 2.32
TNFRSF4-203ENST00000497869 ANTXR1Q9H6X2 564 aa29.56■■■□□ 2.32
TNFRSF4-203ENST00000497869 RASGRF1Q13972 1273 aa29.55■■■□□ 2.32
TNFRSF4-203ENST00000497869 IQSEC3Q9UPP2 1182 aaPredicted RBP29.55■■■□□ 2.32
TNFRSF4-203ENST00000497869 ZAP70P43403 619 aa29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 C15orf52Q6ZUT6 534 aaKnown RBP29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 HMG20BQ9P0W2 317 aa29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 PIM2Q9P1W9 311 aa29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 COL1A1P02452 1464 aaPredicted RBP29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 DPP8Q6V1X1 898 aaPredicted RBP29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 BACH2Q9BYV9 841 aa29.54■■■□□ 2.32
TNFRSF4-203ENST00000497869 TBC1D9Q6ZT07 1266 aa29.53■■■□□ 2.32
TNFRSF4-203ENST00000497869 C6orf229H3BNL8 230 aa29.52■■■□□ 2.32
TNFRSF4-203ENST00000497869 SEC24BO95487 1268 aa29.52■■■□□ 2.32
TNFRSF4-203ENST00000497869 CHGBP05060 677 aa29.52■■■□□ 2.32
TNFRSF4-203ENST00000497869 GOLIM4O00461 696 aa29.51■■■□□ 2.32
TNFRSF4-203ENST00000497869 FKBP4Q02790 459 aaKnown RBP eCLIP29.51■■■□□ 2.32
TNFRSF4-203ENST00000497869 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.32
TNFRSF4-203ENST00000497869 UQCRFS1P1P0C7P4 283 aa29.51■■■□□ 2.31
TNFRSF4-203ENST00000497869 HIBADHP31937 336 aaKnown RBP29.51■■■□□ 2.31
TNFRSF4-203ENST00000497869 CAVIN4Q5BKX8 364 aa29.51■■■□□ 2.31
TNFRSF4-203ENST00000497869 EVI5LQ96CN4 794 aa29.51■■■□□ 2.31
TNFRSF4-203ENST00000497869 FHDC1Q9C0D6 1143 aaPredicted RBP29.51■■■□□ 2.31
TNFRSF4-203ENST00000497869 PAG1Q9NWQ8 432 aa29.51■■■□□ 2.31
TNFRSF4-203ENST00000497869 CYP2E1P05181 493 aaPredicted RBP29.5■■■□□ 2.31
TNFRSF4-203ENST00000497869 CNTROBQ8N137 903 aa29.5■■■□□ 2.31
TNFRSF4-203ENST00000497869 AKAP11Q9UKA4 1901 aa29.5■■■□□ 2.31
TNFRSF4-203ENST00000497869 CDC45O75419 566 aa29.49■■■□□ 2.31
TNFRSF4-203ENST00000497869 RTFDC1Q9BY42 306 aaPredicted RBP29.49■■■□□ 2.31
TNFRSF4-203ENST00000497869 MED23Q9ULK4 1368 aa29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 SPATA5Q8NB90 893 aa29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 BRCA1P38398 1863 aaKnown RBP29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 RIMBP2O15034 1052 aa29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 CHMLP26374 656 aa29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 DALRD3Q5D0E6 543 aaKnown RBP29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 PIH1D3Q9NQM4 214 aaKnown RBP29.48■■■□□ 2.31
TNFRSF4-203ENST00000497869 IL25Q9H293 177 aa29.47■■■□□ 2.31
TNFRSF4-203ENST00000497869 SLFNL1Q499Z3 407 aa29.46■■■□□ 2.31
TNFRSF4-203ENST00000497869 CC2D2BQ6DHV5 1058 aa29.46■■■□□ 2.31
TNFRSF4-203ENST00000497869 VPS37DQ86XT2 251 aa29.46■■■□□ 2.31
TNFRSF4-203ENST00000497869 TMX4Q9H1E5 349 aaPredicted RBP29.46■■■□□ 2.31
TNFRSF4-203ENST00000497869 KBTBD3Q8NAB2 608 aa29.45■■■□□ 2.3
TNFRSF4-203ENST00000497869 TDRD7Q8NHU6 1098 aaKnown RBP29.45■■■□□ 2.3
TNFRSF4-203ENST00000497869 CD209Q9NNX6 404 aa29.45■■■□□ 2.3
TNFRSF4-203ENST00000497869 CCDC93Q567U6 631 aa29.44■■■□□ 2.3
TNFRSF4-203ENST00000497869 FSD1Q9BTV5 496 aa29.44■■■□□ 2.3
TNFRSF4-203ENST00000497869 JAG2Q9Y219 1238 aa29.44■■■□□ 2.3
TNFRSF4-203ENST00000497869 UTRNP46939 3433 aa29.44■■■□□ 2.3
TNFRSF4-203ENST00000497869 WASHC4Q2M389 1173 aa29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 GNL3LQ9NVN8 582 aaKnown RBP29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 BCS1LQ9Y276 419 aa29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 ZBTB22O15209 634 aa29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 IL1R1P14778 569 aa29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 ZNF804AQ7Z570 1209 aa29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 SYT17Q9BSW7 474 aa29.42■■■□□ 2.3
TNFRSF4-203ENST00000497869 DOK7Q18PE1 504 aa29.41■■■□□ 2.3
TNFRSF4-203ENST00000497869 ZC3H12CQ9C0D7 883 aaKnown RBP29.41■■■□□ 2.3
TNFRSF4-203ENST00000497869 FAM227BQ96M60 508 aa29.4■■■□□ 2.3
TNFRSF4-203ENST00000497869 DENND2AQ9ULE3 1009 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms