RNA–Protein interactions for RNA: ENST00000497423.1

LCLAT1-212, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-212ENST00000497423 GMLQ99445 158 aa17.37■□□□□ 0.37
LCLAT1-212ENST00000497423 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
LCLAT1-212ENST00000497423 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
LCLAT1-212ENST00000497423 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
LCLAT1-212ENST00000497423 TMEM88BA6NKF7 163 aa17.36■□□□□ 0.37
LCLAT1-212ENST00000497423 KCNJ4P48050 445 aa17.36■□□□□ 0.37
LCLAT1-212ENST00000497423 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
LCLAT1-212ENST00000497423 HELBQ8NG08 1087 aaPredicted RBP17.36■□□□□ 0.37
LCLAT1-212ENST00000497423 TRPM4Q8TD43 1214 aa17.36■□□□□ 0.37
LCLAT1-212ENST00000497423 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
LCLAT1-212ENST00000497423 SNAP23O00161 211 aa17.35■□□□□ 0.37
LCLAT1-212ENST00000497423 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
LCLAT1-212ENST00000497423 KLRK1P26718 216 aa17.35■□□□□ 0.37
LCLAT1-212ENST00000497423 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
LCLAT1-212ENST00000497423 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
LCLAT1-212ENST00000497423 SAMD7Q7Z3H4 446 aa17.35■□□□□ 0.37
LCLAT1-212ENST00000497423 ZNF646O15015 1829 aaPredicted RBP17.34■□□□□ 0.37
LCLAT1-212ENST00000497423 BCAR3O75815 825 aa17.34■□□□□ 0.37
LCLAT1-212ENST00000497423 ZNF280AP59817 542 aaPredicted RBP17.34■□□□□ 0.37
LCLAT1-212ENST00000497423 DACT2Q5SW24 774 aa17.34■□□□□ 0.37
LCLAT1-212ENST00000497423 PUS3Q9BZE2 481 aaKnown RBP17.34■□□□□ 0.37
LCLAT1-212ENST00000497423 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
LCLAT1-212ENST00000497423 MROH5Q6ZUA9 1318 aa17.33■□□□□ 0.36
LCLAT1-212ENST00000497423 EGFRP00533 1210 aa17.33■□□□□ 0.36
LCLAT1-212ENST00000497423 UBE4AQ14139 1066 aa17.33■□□□□ 0.36
LCLAT1-212ENST00000497423 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.36
LCLAT1-212ENST00000497423 HDAC5Q9UQL6 1122 aa17.33■□□□□ 0.36
LCLAT1-212ENST00000497423 TRPM7Q96QT4 1865 aa17.33■□□□□ 0.36
LCLAT1-212ENST00000497423 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 MMP14P50281 582 aa17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 TBC1D10BQ4KMP7 808 aaPredicted RBP17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 TTLL5Q6EMB2 1281 aa17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 ATF7IPQ6VMQ6 1270 aa17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
LCLAT1-212ENST00000497423 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 PLIN1O60240 522 aa17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 TRIM27P14373 513 aa17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 IL1R1P14778 569 aa17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 RFX5P48382 616 aaPredicted RBP17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 FMR1Q06787 632 aaKnown RBP eCLIP17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 KIF4BQ2VIQ3 1234 aa17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 LRRC24Q50LG9 513 aa17.31■□□□□ 0.36
LCLAT1-212ENST00000497423 PCNTO95613 3336 aa17.3■□□□□ 0.36
LCLAT1-212ENST00000497423 TRAF5O00463 557 aa17.3■□□□□ 0.36
LCLAT1-212ENST00000497423 RBM26Q5T8P6 1007 aaKnown RBP17.3■□□□□ 0.36
LCLAT1-212ENST00000497423 CST9Q5W186 159 aa17.3■□□□□ 0.36
LCLAT1-212ENST00000497423 ZNF804AQ7Z570 1209 aa17.3■□□□□ 0.36
LCLAT1-212ENST00000497423 GLIS2Q9BZE0 524 aaPredicted RBP17.3■□□□□ 0.36
LCLAT1-212ENST00000497423 CNTNAP1P78357 1384 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 GTF2IP78347 998 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 VGLL2Q8N8G2 317 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 KLHDC4Q8TBB5 520 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 MEIS3Q99687 375 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 MXD3Q9BW11 206 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
LCLAT1-212ENST00000497423 RASSF10A6NK89 507 aa17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 PDE8BO95263 885 aa17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 GNAI3P08754 354 aa17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 ZKSCAN2Q63HK3 967 aa17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 DCPSQ96C86 337 aaKnown RBP17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
LCLAT1-212ENST00000497423 EYA2O00167 538 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 SASH1O94885 1247 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 SCARF1Q14162 830 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 DEFB115Q30KQ5 88 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 METTL24Q5JXM2 366 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 TDRD7Q8NHU6 1098 aaKnown RBP17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
LCLAT1-212ENST00000497423 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
LCLAT1-212ENST00000497423 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
LCLAT1-212ENST00000497423 KRT26Q7Z3Y9 468 aa17.26■□□□□ 0.35
LCLAT1-212ENST00000497423 FBXO33Q7Z6M2 555 aa17.26■□□□□ 0.35
LCLAT1-212ENST00000497423 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 PITPNM2Q9BZ72 1349 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 CELF2O95319 508 aaKnown RBP17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 FGFR2P21802 821 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 GYG1P46976 350 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 CLUAP1Q96AJ1 413 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 HDAC9Q9UKV0 1011 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 TLL2Q9Y6L7 1015 aa17.25■□□□□ 0.35
LCLAT1-212ENST00000497423 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 CIAO1O76071 339 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 VEGFBP49765 207 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 MTX1Q13505 466 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 CERS5Q8N5B7 392 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 COPRSQ9NQ92 184 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 GGA3Q9NZ52 723 aa17.24■□□□□ 0.35
LCLAT1-212ENST00000497423 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms