RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SALL4Q9UJQ4 1053 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 TRIM33Q9UPN9 1127 aa6.98□□□□□ -1.29
SMC4-225ENST00000497203 IGHA2P01877 340 aa6.97□□□□□ -1.29
SMC4-225ENST00000497203 TRAPPC3LQ5T215 181 aa6.97□□□□□ -1.29
SMC4-225ENST00000497203 MSL1Q68DK7 614 aa6.97□□□□□ -1.29
SMC4-225ENST00000497203 GDF6Q6KF10 455 aaPredicted RBP6.97□□□□□ -1.29
SMC4-225ENST00000497203 DMRTC2Q8IXT2 367 aaPredicted RBP6.97□□□□□ -1.29
SMC4-225ENST00000497203 SPACA7Q96KW9 195 aa6.97□□□□□ -1.29
SMC4-225ENST00000497203 RASSF4Q9H2L5 321 aa6.97□□□□□ -1.29
SMC4-225ENST00000497203 SPDYE3A6NKU9 549 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 GPR182O15218 404 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 ADAMTSL4Q6UY14 1074 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 WFDC8Q8IUA0 241 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 CITED4Q96RK1 184 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 KRTAP4-2Q9BYR5 136 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 ZFYVE28Q9HCC9 887 aa6.96□□□□□ -1.3
SMC4-225ENST00000497203 A0A0A0MRY4 1105 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 TRPA1O75762 1119 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 PDE3BQ13370 1112 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 DOC2BQ14184 412 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 TMC1Q8TDI8 760 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 PMEPA1Q969W9 287 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 RBCK1Q9BYM8 510 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 PBX4Q9BYU1 374 aa6.95□□□□□ -1.3
SMC4-225ENST00000497203 NFKBIEO00221 500 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 POLR3DP05423 398 aaPredicted RBP6.94□□□□□ -1.3
SMC4-225ENST00000497203 SPATA31C1P0DKV0 1188 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 TRIM28Q13263 835 aaKnown RBP6.94□□□□□ -1.3
SMC4-225ENST00000497203 ORC1Q13415 861 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
SMC4-225ENST00000497203 USPL1Q5W0Q7 1092 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
SMC4-225ENST00000497203 IL22RA1Q8N6P7 574 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 HHIPQ96QV1 700 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 POP1Q99575 1024 aaKnown RBP6.94□□□□□ -1.3
SMC4-225ENST00000497203 LACRTQ9GZZ8 138 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 DCTN4Q9UJW0 460 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 AMOTL2Q9Y2J4 779 aa6.94□□□□□ -1.3
SMC4-225ENST00000497203 SMNDC1O75940 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMC4-225ENST00000497203 GRIK4Q16099 956 aa6.93□□□□□ -1.3
SMC4-225ENST00000497203 TMC7Q7Z402 723 aa6.93□□□□□ -1.3
SMC4-225ENST00000497203 FMR1NBQ8N0W7 255 aaPredicted RBP6.93□□□□□ -1.3
SMC4-225ENST00000497203 NIF3L1Q9GZT8 377 aa6.93□□□□□ -1.3
SMC4-225ENST00000497203 LATS2Q9NRM7 1088 aa6.93□□□□□ -1.3
SMC4-225ENST00000497203 EDN3P14138 238 aa6.92□□□□□ -1.3
SMC4-225ENST00000497203 MAPK1P28482 360 aa6.92□□□□□ -1.3
SMC4-225ENST00000497203 RAC1P63000 192 aa6.92□□□□□ -1.3
SMC4-225ENST00000497203 RSPO4Q2I0M5 234 aaPredicted RBP6.92□□□□□ -1.3
SMC4-225ENST00000497203 PEAR1Q5VY43 1037 aaPredicted RBP6.92□□□□□ -1.3
SMC4-225ENST00000497203 RGS22Q8NE09 1264 aa6.92□□□□□ -1.3
SMC4-225ENST00000497203 OSMRQ99650 979 aa6.92□□□□□ -1.3
SMC4-225ENST00000497203 ZKSCAN3Q9BRR0 538 aa6.92□□□□□ -1.3
SMC4-225ENST00000497203 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
SMC4-225ENST00000497203 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
SMC4-225ENST00000497203 GATA4P43694 442 aa6.91□□□□□ -1.3
SMC4-225ENST00000497203 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
SMC4-225ENST00000497203 DTWD1Q8N5C7 304 aa6.91□□□□□ -1.3
SMC4-225ENST00000497203 DMRTB1Q96MA1 342 aa6.91□□□□□ -1.3
SMC4-225ENST00000497203 SH2B1Q9NRF2 756 aaPredicted RBP6.91□□□□□ -1.3
SMC4-225ENST00000497203 NEFLP07196 543 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 ELNP15502 786 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 PTPRAP18433 802 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 ERCC3P19447 782 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 CDC27P30260 824 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 TXNDC11Q6PKC3 985 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 GALNT12Q8IXK2 581 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
SMC4-225ENST00000497203 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 EIF1AYO14602 144 aaKnown RBP6.89□□□□□ -1.31
SMC4-225ENST00000497203 CPNE3O75131 537 aaKnown RBP6.89□□□□□ -1.31
SMC4-225ENST00000497203 SELPP16109 830 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 EPHA1P21709 976 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 CDC25BP30305 580 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 RANGAP1P46060 587 aaPredicted RBP6.89□□□□□ -1.31
SMC4-225ENST00000497203 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 FBXO11Q86XK2 927 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 TMEM102Q8N9M5 508 aaPredicted RBP6.89□□□□□ -1.31
SMC4-225ENST00000497203 NXPE3Q969Y0 559 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 ALKBH8Q96BT7 664 aaKnown RBP6.89□□□□□ -1.31
SMC4-225ENST00000497203 ADAM19Q9H013 955 aa6.89□□□□□ -1.31
SMC4-225ENST00000497203 A0A1W2PP55 124 aa6.88□□□□□ -1.31
SMC4-225ENST00000497203 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
SMC4-225ENST00000497203 APBA3O96018 575 aa6.88□□□□□ -1.31
SMC4-225ENST00000497203 DSC3Q14574 896 aa6.88□□□□□ -1.31
SMC4-225ENST00000497203 CSRNP1Q96S65 589 aa6.88□□□□□ -1.31
SMC4-225ENST00000497203 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
SMC4-225ENST00000497203 DLL1O00548 723 aa6.87□□□□□ -1.31
SMC4-225ENST00000497203 TREHO43280 583 aa6.87□□□□□ -1.31
SMC4-225ENST00000497203 ARTNQ5T4W7 220 aa6.87□□□□□ -1.31
SMC4-225ENST00000497203 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
SMC4-225ENST00000497203 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
SMC4-225ENST00000497203 BHLHE41Q9C0J9 482 aaPredicted RBP6.87□□□□□ -1.31
SMC4-225ENST00000497203 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms