RNA–Protein interactions for RNA: ENST00000496106.5

ARHGEF3-213, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-213ENST00000496106 SH2B1Q9NRF2 756 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF3-213ENST00000496106 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
ARHGEF3-213ENST00000496106 PDE8BO95263 885 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 ADRA2BP18089 450 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 TSGA10IPQ3SY00 556 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 LMBRD1Q9NUN5 540 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 WDR33Q9C0J8 1336 aaKnown RBP15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 ATP2B3Q16720 1220 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 DDX46Q7L014 1031 aaKnown RBP15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 PAG1Q9NWQ8 432 aa15.96■□□□□ 0.15
ARHGEF3-213ENST00000496106 MROH5Q6ZUA9 1318 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 PHF14O94880 888 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 FGFR2P21802 821 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 RXRBP28702 533 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 RFC4P35249 363 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 TXNRD1Q16881 649 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 DDX49Q9Y6V7 483 aaKnown RBP15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 TNS1Q9HBL0 1735 aaKnown RBP15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 CPA1P15085 419 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 KRT32Q14532 448 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 MCMDC2Q4G0Z9 681 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 NYXQ9GZU5 481 aa15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 ALDH8A1Q9H2A2 487 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
ARHGEF3-213ENST00000496106 PLSCR1O15162 318 aa15.94■□□□□ 0.14
ARHGEF3-213ENST00000496106 IFIT1P09914 478 aaKnown RBP15.94■□□□□ 0.14
ARHGEF3-213ENST00000496106 HELLSQ9NRZ9 838 aa15.94■□□□□ 0.14
ARHGEF3-213ENST00000496106 MYH7P12883 1935 aa15.94■□□□□ 0.14
ARHGEF3-213ENST00000496106 MYO5AQ9Y4I1 1855 aaKnown RBP15.94■□□□□ 0.14
ARHGEF3-213ENST00000496106 GOLIM4O00461 696 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 ANKRD1Q15327 319 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 BLOC1S2Q6QNY1 142 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 TNRC6CQ9HCJ0 1690 aaKnown RBP15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 CHGBP05060 677 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 RPS6KB1P23443 525 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 MRE11P49959 708 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 SCARF1Q14162 830 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 NFIXQ14938 502 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 CCDC158Q5M9N0 1113 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 ZNF512BQ96KM6 892 aaPredicted RBP15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
ARHGEF3-213ENST00000496106 LARGE1O95461 756 aa15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 POTEAQ6S8J7 498 aa15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 TPTE2Q6XPS3 522 aa15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 HELBQ8NG08 1087 aaPredicted RBP15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 MPHOSPH8Q99549 860 aa15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
ARHGEF3-213ENST00000496106 GYS1P13807 737 aa15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 PUM3Q15397 648 aaKnown RBP15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 IGHMBP2P38935 993 aaKnown RBP15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 LRRFIP1Q32MZ4 808 aaKnown RBP15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 TTC39AQ5SRH9 613 aa15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 LPIN2Q92539 896 aa15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
ARHGEF3-213ENST00000496106 MBD3O95983 291 aa15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 GTF2E1P29083 439 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 TM4SF1P30408 202 aa15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 CCDC129Q6ZRS4 1044 aa15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 SEC62Q99442 399 aaKnown RBP15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 DSCC1Q9BVC3 393 aa15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
ARHGEF3-213ENST00000496106 SNAP23O00161 211 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 PRPF40AO75400 957 aaKnown RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 MCAMP43121 646 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 FOXD4L5Q5VV16 416 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 FOXD4L4Q8WXT5 416 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 NLRP3Q96P20 1036 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 GRPEL1Q9HAV7 217 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 LAMA4Q16363 1823 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 APBA3O96018 575 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 ZSCAN22P10073 491 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 ARID4AP29374 1257 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 CHRNDQ07001 517 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 ST3GAL1Q11201 340 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 ME3Q16798 604 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 CELF1Q92879 486 aaKnown RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 BSDC1Q9NW68 430 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 TAF6LQ9Y6J9 622 aa15.89■□□□□ 0.13
ARHGEF3-213ENST00000496106 MAST3O60307 1309 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 STX6O43752 255 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 ZFYP08048 801 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 ZAP70P43403 619 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 PHKA1P46020 1223 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 ZNF445P59923 1031 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 CCDC102BQ68D86 513 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 PI16Q6UXB8 463 aa15.88■□□□□ 0.13
ARHGEF3-213ENST00000496106 ANKRD18AQ8IVF6 992 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms