RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SLC10A4Q96EP9 437 aa6.12□□□□□ -1.43
VPS52-222ENST00000495981 ZNF358Q9NW07 568 aa6.12□□□□□ -1.43
VPS52-222ENST00000495981 TRAK1Q9UPV9 953 aa6.12□□□□□ -1.43
VPS52-222ENST00000495981 LTN1O94822 1766 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 CPSF1Q10570 1443 aaKnown RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 C11orf95C9JLR9 678 aaPredicted RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 PTCD1O75127 700 aaKnown RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 STAU1O95793 577 aaKnown RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 IGHA2P01877 340 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 P4HBP07237 508 aaKnown RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 EPHA4P54764 986 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 NAA30Q147X3 362 aaPredicted RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 NBPF20Q3BBV1 942 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 THSD4Q6ZMP0 1018 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 SMIM5Q71RC9 77 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 COL23A1Q86Y22 540 aaPredicted RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 SLC16A10Q8TF71 515 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 RBCK1Q9BYM8 510 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 POGKQ9P215 609 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 HCSTQ9UBK5 93 aa6.11□□□□□ -1.43
VPS52-222ENST00000495981 RBM19Q9Y4C8 960 aaKnown RBP6.11□□□□□ -1.43
VPS52-222ENST00000495981 FAM208AQ9UK61 1670 aaKnown RBP6.1□□□□□ -1.43
VPS52-222ENST00000495981 GCP02774 474 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 IGFBP4P22692 258 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 SCNN1DP51172 638 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 PTPN5P54829 565 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 SH3BP2P78314 561 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 TMC7Q7Z402 723 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 ZNF516Q92618 1163 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 MTRQ99707 1265 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 SLC6A16Q9GZN6 736 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 TUBGCP6Q96RT7 1819 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 COL24A1Q17RW2 1714 aa6.1□□□□□ -1.43
VPS52-222ENST00000495981 CRB1P82279 1406 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 QSER1Q2KHR3 1735 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 TJAP1Q5JTD0 557 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 AMIGO3Q86WK7 504 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 ZSCAN29Q8IWY8 852 aaPredicted RBP6.09□□□□□ -1.43
VPS52-222ENST00000495981 DCAF11Q8TEB1 546 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 BACH2Q9BYV9 841 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 SAP130Q9H0E3 1048 aa6.09□□□□□ -1.43
VPS52-222ENST00000495981 CD163L1Q9NR16 1453 aa6.09□□□□□ -1.44
VPS52-222ENST00000495981 BRD4O60885 1362 aaPredicted RBP6.08□□□□□ -1.44
VPS52-222ENST00000495981 ACEP12821 1306 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 TREHO43280 583 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 MPSTP25325 297 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 FMR1Q06787 632 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS52-222ENST00000495981 DSC3Q14574 896 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 AGERQ15109 404 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 TSNAXIP1Q2TAA8 658 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 EAPPQ56P03 285 aaPredicted RBP6.08□□□□□ -1.44
VPS52-222ENST00000495981 INTS6LQ5JSJ4 861 aaKnown RBP6.08□□□□□ -1.44
VPS52-222ENST00000495981 TOM1L2Q6ZVM7 507 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 SREK1Q8WXA9 508 aaKnown RBP6.08□□□□□ -1.44
VPS52-222ENST00000495981 NUDT16Q96DE0 195 aaKnown RBP6.08□□□□□ -1.44
VPS52-222ENST00000495981 TFCP2L1Q9NZI6 479 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 BTAF1O14981 1849 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 DOT1LQ8TEK3 1739 aa6.08□□□□□ -1.44
VPS52-222ENST00000495981 IGSF1Q8N6C5 1336 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 ERVH48-1M5A8F1 160 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 EXOC5O00471 708 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 TNFRSF10BO14763 440 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 FOXN1O15353 648 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 S1PR4O95977 384 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 ERVK-9P63128 1117 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 HDLBPQ00341 1268 aaKnown RBP6.07□□□□□ -1.44
VPS52-222ENST00000495981 ABTB2Q8N961 1025 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 NKX2-3Q8TAU0 364 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 KCTD15Q96SI1 283 aaPredicted RBP6.07□□□□□ -1.44
VPS52-222ENST00000495981 OSBPL3Q9H4L5 887 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 RNF19AQ9NV58 838 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 FCF1Q9Y324 198 aaKnown RBP6.07□□□□□ -1.44
VPS52-222ENST00000495981 CD2APQ9Y5K6 639 aa6.07□□□□□ -1.44
VPS52-222ENST00000495981 A0A1W2PRU2 124 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 FZD6O60353 706 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 RAB15P59190 212 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 RAD51AP2Q09MP3 1159 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 FAM177A1Q8N128 213 aaPredicted RBP6.06□□□□□ -1.44
VPS52-222ENST00000495981 SCG3Q8WXD2 468 aaKnown RBP6.06□□□□□ -1.44
VPS52-222ENST00000495981 DRC1Q96MC2 740 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 PUS7Q96PZ0 661 aaKnown RBP6.06□□□□□ -1.44
VPS52-222ENST00000495981 CDK19Q9BWU1 502 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 TSPAN10Q9H1Z9 355 aaPredicted RBP6.06□□□□□ -1.44
VPS52-222ENST00000495981 CDV3Q9UKY7 258 aaKnown RBP6.06□□□□□ -1.44
VPS52-222ENST00000495981 SBNO2Q9Y2G9 1366 aa6.06□□□□□ -1.44
VPS52-222ENST00000495981 ANKRD26Q9UPS8 1709 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 WDR17Q8IZU2 1322 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 CENPJQ9HC77 1338 aaPredicted RBP6.05□□□□□ -1.44
VPS52-222ENST00000495981 FAM13AO94988 1023 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 MYCP01106 439 aaPredicted RBP6.05□□□□□ -1.44
VPS52-222ENST00000495981 FOXK2Q01167 660 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 FSTL1Q12841 308 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 NBPF1Q3BBV0 1214 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 NAALADL2Q58DX5 795 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 FAM26DQ5JW98 314 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 CARD10Q9BWT7 1032 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 ETNK1Q9HBU6 452 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 CCDC87Q9NVE4 849 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 MAP4K5Q9Y4K4 846 aa6.05□□□□□ -1.44
VPS52-222ENST00000495981 LY75O60449 1722 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms