RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 NACC1Q96RE7 527 aa9.91□□□□□ -0.82
CCDC39-207ENST00000495817 DNAJC25Q9H1X3 360 aa9.91□□□□□ -0.82
CCDC39-207ENST00000495817 TRIM33Q9UPN9 1127 aa9.91□□□□□ -0.82
CCDC39-207ENST00000495817 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
CCDC39-207ENST00000495817 FAM177BA6PVY3 158 aa9.9□□□□□ -0.82
CCDC39-207ENST00000495817 MAPK1P28482 360 aa9.9□□□□□ -0.82
CCDC39-207ENST00000495817 GDF6Q6KF10 455 aaPredicted RBP9.9□□□□□ -0.82
CCDC39-207ENST00000495817 DMRTC2Q8IXT2 367 aaPredicted RBP9.9□□□□□ -0.82
CCDC39-207ENST00000495817 FMR1NBQ8N0W7 255 aaPredicted RBP9.9□□□□□ -0.82
CCDC39-207ENST00000495817 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
CCDC39-207ENST00000495817 CPNE3O75131 537 aaKnown RBP9.89□□□□□ -0.83
CCDC39-207ENST00000495817 IGHA1P01876 353 aa9.89□□□□□ -0.83
CCDC39-207ENST00000495817 PTPRAP18433 802 aa9.89□□□□□ -0.83
CCDC39-207ENST00000495817 BAG6P46379 1132 aa9.89□□□□□ -0.83
CCDC39-207ENST00000495817 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
CCDC39-207ENST00000495817 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
CCDC39-207ENST00000495817 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
CCDC39-207ENST00000495817 GALNT12Q8IXK2 581 aa9.88□□□□□ -0.83
CCDC39-207ENST00000495817 IL22RA1Q8N6P7 574 aa9.88□□□□□ -0.83
CCDC39-207ENST00000495817 TMEM102Q8N9M5 508 aaPredicted RBP9.88□□□□□ -0.83
CCDC39-207ENST00000495817 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
CCDC39-207ENST00000495817 PDE2AO00408 941 aaPredicted RBP9.87□□□□□ -0.83
CCDC39-207ENST00000495817 APBA3O96018 575 aa9.87□□□□□ -0.83
CCDC39-207ENST00000495817 CDC27P30260 824 aa9.87□□□□□ -0.83
CCDC39-207ENST00000495817 FBXO11Q86XK2 927 aa9.87□□□□□ -0.83
CCDC39-207ENST00000495817 OSMRQ99650 979 aa9.87□□□□□ -0.83
CCDC39-207ENST00000495817 ZKSCAN3Q9BRR0 538 aa9.87□□□□□ -0.83
CCDC39-207ENST00000495817 ADAM19Q9H013 955 aa9.87□□□□□ -0.83
CCDC39-207ENST00000495817 FAM229AH3BQW9 127 aa9.86□□□□□ -0.83
CCDC39-207ENST00000495817 NFKBIEO00221 500 aa9.86□□□□□ -0.83
CCDC39-207ENST00000495817 RBM25P49756 843 aaKnown RBP9.86□□□□□ -0.83
CCDC39-207ENST00000495817 ASB16Q96NS5 453 aa9.86□□□□□ -0.83
CCDC39-207ENST00000495817 POP1Q99575 1024 aaKnown RBP9.86□□□□□ -0.83
CCDC39-207ENST00000495817 BHLHE41Q9C0J9 482 aaPredicted RBP9.86□□□□□ -0.83
CCDC39-207ENST00000495817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.86□□□□□ -0.83
CCDC39-207ENST00000495817 RBM47A0AV96 593 aaKnown RBP9.85□□□□□ -0.83
CCDC39-207ENST00000495817 TREHO43280 583 aa9.85□□□□□ -0.83
CCDC39-207ENST00000495817 ORC1Q13415 861 aa9.85□□□□□ -0.83
CCDC39-207ENST00000495817 PEAR1Q5VY43 1037 aaPredicted RBP9.85□□□□□ -0.83
CCDC39-207ENST00000495817 NIF3L1Q9GZT8 377 aa9.85□□□□□ -0.83
CCDC39-207ENST00000495817 LACRTQ9GZZ8 138 aa9.85□□□□□ -0.83
CCDC39-207ENST00000495817 EIF1AYO14602 144 aaKnown RBP9.84□□□□□ -0.83
CCDC39-207ENST00000495817 ACPPP15309 386 aa9.84□□□□□ -0.83
CCDC39-207ENST00000495817 CSRNP1Q96S65 589 aa9.84□□□□□ -0.83
CCDC39-207ENST00000495817 C9orf172C9J069 976 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 CABP4P57796 275 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 NRG1Q02297 640 aaPredicted RBP9.83□□□□□ -0.84
CCDC39-207ENST00000495817 FAM117BQ6P1L5 589 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 CD163Q86VB7 1156 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 WNT8BQ93098 351 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 NXPE3Q969Y0 559 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 ZNF428Q96B54 188 aa9.83□□□□□ -0.84
CCDC39-207ENST00000495817 ANKRD33BA6NCL7 494 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
CCDC39-207ENST00000495817 ITGB2P05107 769 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 CHRNA4P43681 627 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 DSC3Q14574 896 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 GPAT2Q6NUI2 795 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 BSNDQ8WZ55 320 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 LENG1Q96BZ8 264 aaPredicted RBP9.82□□□□□ -0.84
CCDC39-207ENST00000495817 LATS2Q9NRM7 1088 aa9.82□□□□□ -0.84
CCDC39-207ENST00000495817 C1QTNF9BB2RNN3 333 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 E9PSI1 815 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 H3BRJ5 948 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 DLL1O00548 723 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 MSTNO14793 375 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 POLR3DP05423 398 aaPredicted RBP9.81□□□□□ -0.84
CCDC39-207ENST00000495817 KIAA0319Q5VV43 1072 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 USPL1Q5W0Q7 1092 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 IGF2-ASQ6U949 168 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 NPAS4Q8IUM7 802 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 SOX13Q9UN79 622 aa9.81□□□□□ -0.84
CCDC39-207ENST00000495817 A0A1W2PP55 124 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 EPHA1P21709 976 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 PIP4K2BP78356 416 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 PLCB3Q01970 1234 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 FMR1Q06787 632 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC39-207ENST00000495817 SETDB1Q15047 1291 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 GRIK4Q16099 956 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 CCDC74AQ96AQ1 378 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 HHIPQ96QV1 700 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 NPHS2Q9NP85 383 aa9.8□□□□□ -0.84
CCDC39-207ENST00000495817 SELPP16109 830 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 ENOX2Q16206 610 aaKnown RBP9.79□□□□□ -0.84
CCDC39-207ENST00000495817 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 CCNJLQ8IV13 435 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 KLHL23Q8NBE8 558 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 SPOCK3Q9BQ16 436 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 LIN7BQ9HAP6 207 aa9.79□□□□□ -0.84
CCDC39-207ENST00000495817 LINC01387J3KSC0 135 aa9.78□□□□□ -0.84
CCDC39-207ENST00000495817 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
CCDC39-207ENST00000495817 TRPA1O75762 1119 aa9.78□□□□□ -0.84
CCDC39-207ENST00000495817 PROCP04070 461 aa9.78□□□□□ -0.84
CCDC39-207ENST00000495817 FBF1Q8TES7 1133 aa9.78□□□□□ -0.84
CCDC39-207ENST00000495817 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
CCDC39-207ENST00000495817 TRAK1Q9UPV9 953 aa9.78□□□□□ -0.84
CCDC39-207ENST00000495817 PNMA6FA0A0J9YX94 578 aa9.77□□□□□ -0.85
CCDC39-207ENST00000495817 FSCN2O14926 492 aa9.77□□□□□ -0.85
CCDC39-207ENST00000495817 ADGRE1Q14246 886 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms