RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 ADGRL1O94910 1474 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 PLEKHH2Q8IVE3 1493 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 NEO1Q92859 1461 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 CROCC2H7BZ55 1655 aa8.23□□□□□ -1.09
GAPVD1-218ENST00000495588 USP17L5A8MUK1 530 aa8.22□□□□□ -1.09
GAPVD1-218ENST00000495588 SSTR4P31391 388 aa8.22□□□□□ -1.09
GAPVD1-218ENST00000495588 IRAK1P51617 712 aa8.22□□□□□ -1.09
GAPVD1-218ENST00000495588 FMNL2Q96PY5 1086 aa8.22□□□□□ -1.09
GAPVD1-218ENST00000495588 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
GAPVD1-218ENST00000495588 SCAPERQ9BY12 1400 aa8.21□□□□□ -1.09
GAPVD1-218ENST00000495588 TRAPPC8Q9Y2L5 1435 aa8.21□□□□□ -1.09
GAPVD1-218ENST00000495588 CCDC141Q6ZP82 1450 aa8.21□□□□□ -1.09
GAPVD1-218ENST00000495588 TEX14Q8IWB6 1497 aa8.21□□□□□ -1.09
GAPVD1-218ENST00000495588 USP17L3A6NCW0 530 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 USP17L4A6NCW7 530 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 NFKB1P19838 968 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 ATP1A2P50993 1020 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 CCINQ13939 588 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 ELOAQ14241 798 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 USP17L2Q6R6M4 530 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 USP17L1Q7RTZ2 530 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 DEPDC4Q8N2C3 294 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 FRRS1LQ9P0K9 344 aa8.21□□□□□ -1.1
GAPVD1-218ENST00000495588 CPB1P15086 417 aa8.2□□□□□ -1.1
GAPVD1-218ENST00000495588 FSTP19883 344 aa8.2□□□□□ -1.1
GAPVD1-218ENST00000495588 C9orf84Q5VXU9 1444 aa8.2□□□□□ -1.1
GAPVD1-218ENST00000495588 SHANK2Q9UPX8 1470 aa8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 ADGBQ8N7X0 1667 aa8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 PPP1R12BO60237 982 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 CCDC102BQ68D86 513 aa8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 POGZQ7Z3K3 1410 aa8.19□□□□□ -1.1
GAPVD1-218ENST00000495588 MAST1Q9Y2H9 1570 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 RICTORQ6R327 1708 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 CD97P48960 835 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 GRIK5Q16478 980 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 ELMSAN1Q6PJG2 1045 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 AFAP1Q8N556 730 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 LPIN3Q9BQK8 851 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 DENND4BO75064 1496 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 ADGRL2O95490 1459 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 ZNF518AQ6AHZ1 1483 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 KDM5CP41229 1560 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 FRMPD1Q5SYB0 1578 aa8.18□□□□□ -1.1
GAPVD1-218ENST00000495588 TMEM88BA6NKF7 163 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 M0R2N6 131 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 PTCD1O75127 700 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 RAPGEF3O95398 923 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 TSPY4P0CV99 314 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 TSPY10P0CW01 314 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 AKTIPQ9H8T0 292 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 RRP7BPQ9NSQ0 103 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 KIAA1024Q9UPX6 916 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 ZFYVE16Q7Z3T8 1539 aa8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 INO80Q9ULG1 1556 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-218ENST00000495588 HFM1A2PYH4 1435 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 ZBTB7BO15156 539 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 EPB42P16452 691 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 ROCK1Q13464 1354 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 NCOA1Q15788 1441 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 IER5Q5VY09 327 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 GCC2Q8IWJ2 1684 aa8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-218ENST00000495588 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 PLXNC1O60486 1568 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 HECW2Q9P2P5 1572 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 RTEL1-TNFRSF6BF6WH68 1400 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 NAIPQ13075 1403 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 SETD5Q9C0A6 1442 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 ANKRD30AQ9BXX3 1397 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 SPAG9O60271 1321 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 PERM1Q5SV97 790 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 MKRN1Q9UHC7 482 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 ZMIZ1Q9ULJ6 1067 aa8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 RBM19Q9Y4C8 960 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-218ENST00000495588 KDM6BO15054 1643 aa8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 DEAF1O75398 565 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 MAP3K6O95382 1288 aa8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 TAL1P17542 331 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 CLDN10P78369 228 aa8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 TSEN2Q8NCE0 465 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 TTC9Q92623 222 aa8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-218ENST00000495588 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 MLH3Q9UHC1 1453 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 RAB3GAP2Q9H2M9 1393 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 TGFBR3LH3BV60 316 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 DLL1O00548 723 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 GSC2O15499 205 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 PTK7Q13308 1070 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 CRTC2Q53ET0 693 aaPredicted RBP8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 DHX32Q7L7V1 743 aaKnown RBP8.13□□□□□ -1.11
GAPVD1-218ENST00000495588 STAG2Q8N3U4 1231 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms