RNA–Protein interactions for RNA: ENST00000495503.5

ZNF561-220, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 880 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-220ENST00000495503 BBOX1O75936 387 aa10.08□□□□□ -0.8
ZNF561-220ENST00000495503 RPS12P25398 132 aaKnown RBP10.08□□□□□ -0.8
ZNF561-220ENST00000495503 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
ZNF561-220ENST00000495503 CD99L2Q8TCZ2 262 aa10.08□□□□□ -0.8
ZNF561-220ENST00000495503 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
ZNF561-220ENST00000495503 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
ZNF561-220ENST00000495503 HS3ST6Q96QI5 342 aa10.08□□□□□ -0.8
ZNF561-220ENST00000495503 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
ZNF561-220ENST00000495503 IGF2BP3O00425 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
ZNF561-220ENST00000495503 ZNF280AP59817 542 aaPredicted RBP10.07□□□□□ -0.8
ZNF561-220ENST00000495503 GAS2L2Q8NHY3 880 aa10.07□□□□□ -0.8
ZNF561-220ENST00000495503 POLLQ9UGP5 575 aa10.07□□□□□ -0.8
ZNF561-220ENST00000495503 FAM205CA6NFA0 338 aa10.06□□□□□ -0.8
ZNF561-220ENST00000495503 WTIPA6NIX2 430 aaPredicted RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 ECE2O60344 883 aa10.06□□□□□ -0.8
ZNF561-220ENST00000495503 DIAPH1O60610 1272 aaKnown RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 VIL1P09327 827 aaKnown RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
ZNF561-220ENST00000495503 TMX4Q9H1E5 349 aaPredicted RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 DDX60Q8IY21 1712 aaKnown RBP10.06□□□□□ -0.8
ZNF561-220ENST00000495503 LAMB1P07942 1786 aa10.06□□□□□ -0.8
ZNF561-220ENST00000495503 EYSQ5T1H1 3165 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 SREBF2Q12772 1141 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 GRAPQ13588 217 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 AMER1Q5JTC6 1135 aaPredicted RBP10.05□□□□□ -0.8
ZNF561-220ENST00000495503 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 MCM10Q7L590 875 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
ZNF561-220ENST00000495503 MIS18AQ9NYP9 233 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 FZD1Q9UP38 647 aa10.05□□□□□ -0.8
ZNF561-220ENST00000495503 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
ZNF561-220ENST00000495503 MYL6BP14649 208 aa10.04□□□□□ -0.8
ZNF561-220ENST00000495503 HOXB3P14651 431 aaPredicted RBP10.04□□□□□ -0.8
ZNF561-220ENST00000495503 GPSM2P81274 684 aa10.04□□□□□ -0.8
ZNF561-220ENST00000495503 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
ZNF561-220ENST00000495503 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
ZNF561-220ENST00000495503 GMLQ99445 158 aa10.04□□□□□ -0.8
ZNF561-220ENST00000495503 RRP7AQ9Y3A4 280 aaKnown RBP10.04□□□□□ -0.8
ZNF561-220ENST00000495503 ZSWIM8A7E2V4 1837 aa10.04□□□□□ -0.8
ZNF561-220ENST00000495503 PSME4Q14997 1843 aa10.04□□□□□ -0.8
ZNF561-220ENST00000495503 PRKG1Q13976 671 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 NBPF9Q3BBW0 867 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 LDLRAD1Q5T700 205 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 LRP10Q7Z4F1 713 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 PPP1R42Q7Z4L9 355 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 CELF1Q92879 486 aaKnown RBP10.03□□□□□ -0.8
ZNF561-220ENST00000495503 UTP14AQ9BVJ6 771 aaKnown RBP10.03□□□□□ -0.8
ZNF561-220ENST00000495503 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
ZNF561-220ENST00000495503 PTCH2Q9Y6C5 1203 aa10.03□□□□□ -0.8
ZNF561-220ENST00000495503 ZNF646O15015 1829 aaPredicted RBP10.03□□□□□ -0.8
ZNF561-220ENST00000495503 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
ZNF561-220ENST00000495503 CRHR2Q13324 411 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
ZNF561-220ENST00000495503 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 TBC1D16Q8TBP0 767 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 ZNF428Q96B54 188 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 ERO1AQ96HE7 468 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 MYOZ2Q9NPC6 264 aa10.02□□□□□ -0.81
ZNF561-220ENST00000495503 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
ZNF561-220ENST00000495503 U2SURPO15042 1029 aaKnown RBP10.01□□□□□ -0.81
ZNF561-220ENST00000495503 ALDH1A1P00352 501 aa10.01□□□□□ -0.81
ZNF561-220ENST00000495503 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
ZNF561-220ENST00000495503 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
ZNF561-220ENST00000495503 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
ZNF561-220ENST00000495503 UBE2Q1Q7Z7E8 422 aa10.01□□□□□ -0.81
ZNF561-220ENST00000495503 PTPN18Q99952 460 aa10.01□□□□□ -0.81
ZNF561-220ENST00000495503 THUMPD2Q9BTF0 503 aaKnown RBP10.01□□□□□ -0.81
ZNF561-220ENST00000495503 MUC3AQ02505 3323 aa10.01□□□□□ -0.81
ZNF561-220ENST00000495503 PRKAR2BP31323 418 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 GJA5P36382 358 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 SLC4A8Q2Y0W8 1093 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 Q7L0L9 218 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 NLRP10Q86W26 655 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 SH3TC2Q8TF17 1288 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 DPF3Q92784 378 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 CLMNQ96JQ2 1002 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 SSC5DA1L4H1 1573 aa10□□□□□ -0.81
ZNF561-220ENST00000495503 MANSC4A6NHS7 340 aaPredicted RBP9.99□□□□□ -0.81
ZNF561-220ENST00000495503 USP17L8P0C7I0 530 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 SP3Q02447 781 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 PDIA6Q15084 440 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 SLC9C1Q4G0N8 1177 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 EFCAB3Q8N7B9 438 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 AGBL3Q8NEM8 1001 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 MXD3Q9BW11 206 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
ZNF561-220ENST00000495503 PRUNE2Q8WUY3 3088 aa9.99□□□□□ -0.81
ZNF561-220ENST00000495503 LAMA2P24043 3122 aaKnown RBP9.99□□□□□ -0.81
ZNF561-220ENST00000495503 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
ZNF561-220ENST00000495503 TCIRG1Q13488 830 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms