RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
MRPL55-232ENST00000495434 MMP14P50281 582 aa17.64■□□□□ 0.41
MRPL55-232ENST00000495434 ZNF280AP59817 542 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-232ENST00000495434 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
MRPL55-232ENST00000495434 STRIP1Q5VSL9 837 aa17.64■□□□□ 0.41
MRPL55-232ENST00000495434 SAMD7Q7Z3H4 446 aa17.64■□□□□ 0.41
MRPL55-232ENST00000495434 TXNRD3Q86VQ6 643 aa17.64■□□□□ 0.41
MRPL55-232ENST00000495434 ZNF594Q96JF6 807 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-232ENST00000495434 CNNM1Q9NRU3 951 aa17.64■□□□□ 0.41
MRPL55-232ENST00000495434 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
MRPL55-232ENST00000495434 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
MRPL55-232ENST00000495434 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
MRPL55-232ENST00000495434 MYO3BQ8WXR4 1341 aa17.63■□□□□ 0.41
MRPL55-232ENST00000495434 CNTNAP1P78357 1384 aa17.63■□□□□ 0.41
MRPL55-232ENST00000495434 TAF5LO75529 589 aa17.62■□□□□ 0.41
MRPL55-232ENST00000495434 TBC1D10BQ4KMP7 808 aaPredicted RBP17.62■□□□□ 0.41
MRPL55-232ENST00000495434 DACT2Q5SW24 774 aa17.62■□□□□ 0.41
MRPL55-232ENST00000495434 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
MRPL55-232ENST00000495434 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
MRPL55-232ENST00000495434 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-232ENST00000495434 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
MRPL55-232ENST00000495434 USP17L8P0C7I0 530 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 KLRK1P26718 216 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 UBE4AQ14139 1066 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 KIF4BQ2VIQ3 1234 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 TTLL5Q6EMB2 1281 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 CD209Q9NNX6 404 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
MRPL55-232ENST00000495434 RASSF10A6NK89 507 aa17.6■□□□□ 0.41
MRPL55-232ENST00000495434 TRAF5O00463 557 aa17.6■□□□□ 0.41
MRPL55-232ENST00000495434 EGFRP00533 1210 aa17.6■□□□□ 0.41
MRPL55-232ENST00000495434 CST9Q5W186 159 aa17.6■□□□□ 0.41
MRPL55-232ENST00000495434 ZNF804AQ7Z570 1209 aa17.6■□□□□ 0.41
MRPL55-232ENST00000495434 GLIS2Q9BZE0 524 aaPredicted RBP17.6■□□□□ 0.41
MRPL55-232ENST00000495434 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
MRPL55-232ENST00000495434 POLR2AP24928 1970 aaKnown RBP17.6■□□□□ 0.41
MRPL55-232ENST00000495434 ZBED9Q6R2W3 1325 aa17.59■□□□□ 0.41
MRPL55-232ENST00000495434 SNAP23O00161 211 aa17.59■□□□□ 0.41
MRPL55-232ENST00000495434 UBTFL1P0CB47 393 aaPredicted RBP17.59■□□□□ 0.41
MRPL55-232ENST00000495434 IL1R1P14778 569 aa17.59■□□□□ 0.41
MRPL55-232ENST00000495434 DEFB115Q30KQ5 88 aa17.59■□□□□ 0.41
MRPL55-232ENST00000495434 RBM26Q5T8P6 1007 aaKnown RBP17.59■□□□□ 0.41
MRPL55-232ENST00000495434 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
MRPL55-232ENST00000495434 DCPSQ96C86 337 aaKnown RBP17.59■□□□□ 0.41
MRPL55-232ENST00000495434 PLIN1O60240 522 aa17.58■□□□□ 0.4
MRPL55-232ENST00000495434 FMR1Q06787 632 aaKnown RBP eCLIP17.58■□□□□ 0.4
MRPL55-232ENST00000495434 OGFOD1Q8N543 542 aa17.58■□□□□ 0.4
MRPL55-232ENST00000495434 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.4
MRPL55-232ENST00000495434 MYOZ2Q9NPC6 264 aa17.58■□□□□ 0.4
MRPL55-232ENST00000495434 FKBP1AP62942 108 aaKnown RBP17.57■□□□□ 0.4
MRPL55-232ENST00000495434 GTF2IP78347 998 aa17.57■□□□□ 0.4
MRPL55-232ENST00000495434 KRT26Q7Z3Y9 468 aa17.57■□□□□ 0.4
MRPL55-232ENST00000495434 ABT1Q9ULW3 272 aaKnown RBP17.57■□□□□ 0.4
MRPL55-232ENST00000495434 TLL2Q9Y6L7 1015 aa17.57■□□□□ 0.4
MRPL55-232ENST00000495434 PITPNM2Q9BZ72 1349 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 CELF2O95319 508 aaKnown RBP17.56■□□□□ 0.4
MRPL55-232ENST00000495434 VEGFBP49765 207 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 HHIPL1Q96JK4 782 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
MRPL55-232ENST00000495434 BCAR3O75815 825 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 PDE8BO95263 885 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 TRIM27P14373 513 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 RFX5P48382 616 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-232ENST00000495434 SCARF1Q14162 830 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 SULF1Q8IWU6 871 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 GGA3Q9NZ52 723 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 HDAC9Q9UKV0 1011 aa17.55■□□□□ 0.4
MRPL55-232ENST00000495434 SASH1O94885 1247 aa17.54■□□□□ 0.4
MRPL55-232ENST00000495434 GNAI3P08754 354 aa17.54■□□□□ 0.4
MRPL55-232ENST00000495434 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
MRPL55-232ENST00000495434 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
MRPL55-232ENST00000495434 VGLL2Q8N8G2 317 aa17.54■□□□□ 0.4
MRPL55-232ENST00000495434 MXD3Q9BW11 206 aa17.54■□□□□ 0.4
MRPL55-232ENST00000495434 HIBADHP31937 336 aaKnown RBP17.53■□□□□ 0.4
MRPL55-232ENST00000495434 ECE1P42892 770 aa17.53■□□□□ 0.4
MRPL55-232ENST00000495434 TDRD7Q8NHU6 1098 aaKnown RBP17.53■□□□□ 0.4
MRPL55-232ENST00000495434 FAM84BQ96KN1 310 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-232ENST00000495434 MEIS3Q99687 375 aa17.53■□□□□ 0.4
MRPL55-232ENST00000495434 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.4
MRPL55-232ENST00000495434 WDR33Q9C0J8 1336 aaKnown RBP17.52■□□□□ 0.4
MRPL55-232ENST00000495434 EYA2O00167 538 aa17.52■□□□□ 0.4
MRPL55-232ENST00000495434 WNT10BO00744 389 aa17.52■□□□□ 0.4
MRPL55-232ENST00000495434 ANGEL2Q5VTE6 544 aaKnown RBP17.52■□□□□ 0.4
MRPL55-232ENST00000495434 FBXO33Q7Z6M2 555 aa17.52■□□□□ 0.4
MRPL55-232ENST00000495434 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
MRPL55-232ENST00000495434 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
MRPL55-232ENST00000495434 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
MRPL55-232ENST00000495434 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
MRPL55-232ENST00000495434 CIAO1O76071 339 aa17.51■□□□□ 0.39
MRPL55-232ENST00000495434 HSPA1AP0DMV8 641 aaKnown RBP17.51■□□□□ 0.39
MRPL55-232ENST00000495434 HSPA1BP0DMV9 641 aaKnown RBP17.51■□□□□ 0.39
MRPL55-232ENST00000495434 GYG1P46976 350 aa17.51■□□□□ 0.39
MRPL55-232ENST00000495434 CAVIN4Q5BKX8 364 aa17.51■□□□□ 0.39
MRPL55-232ENST00000495434 ZKSCAN2Q63HK3 967 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms