RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 HOMER1Q86YM7 354 aa20.62■□□□□ 0.89
BRD9-212ENST00000495265 DNAJC2Q99543 621 aaKnown RBP20.62■□□□□ 0.89
BRD9-212ENST00000495265 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
BRD9-212ENST00000495265 AMOTL2Q9Y2J4 779 aa20.62■□□□□ 0.89
BRD9-212ENST00000495265 FAM193AP78312 1265 aa20.61■□□□□ 0.89
BRD9-212ENST00000495265 ZNF530Q6P9A1 599 aaPredicted RBP20.61■□□□□ 0.89
BRD9-212ENST00000495265 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
BRD9-212ENST00000495265 DNAI1Q9UI46 699 aa20.61■□□□□ 0.89
BRD9-212ENST00000495265 HNRNPH2P55795 449 aaKnown RBP20.6■□□□□ 0.89
BRD9-212ENST00000495265 KIAA1468Q9P260 1216 aa20.6■□□□□ 0.89
BRD9-212ENST00000495265 UTYO14607 1347 aa20.6■□□□□ 0.89
BRD9-212ENST00000495265 CAPN2P17655 700 aa20.6■□□□□ 0.89
BRD9-212ENST00000495265 EPHA10Q5JZY3 1008 aa20.6■□□□□ 0.89
BRD9-212ENST00000495265 CREBRFQ8IUR6 639 aa20.59■□□□□ 0.89
BRD9-212ENST00000495265 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 ORC3Q9UBD5 711 aaPredicted RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 ZRANB2O95218 330 aaKnown RBP eCLIP20.59■□□□□ 0.892e-6■■■■■ 31
BRD9-212ENST00000495265 ATP5JP18859 108 aa20.59■□□□□ 0.89
BRD9-212ENST00000495265 ZRSR1Q15695 479 aaKnown RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 DHX32Q7L7V1 743 aaKnown RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 MARF1Q9Y4F3 1742 aaKnown RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
BRD9-212ENST00000495265 POLR3GO15318 223 aaPredicted RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 IGKV5-2P06315 115 aa20.59■□□□□ 0.89
BRD9-212ENST00000495265 ETF1P62495 437 aaKnown RBP20.59■□□□□ 0.89
BRD9-212ENST00000495265 MCMDC2Q4G0Z9 681 aa20.59■□□□□ 0.89
BRD9-212ENST00000495265 ATL3Q6DD88 541 aa20.59■□□□□ 0.89
BRD9-212ENST00000495265 NEDD4P46934 1319 aa20.58■□□□□ 0.89
BRD9-212ENST00000495265 TULP2O00295 520 aa20.58■□□□□ 0.89
BRD9-212ENST00000495265 FANCGO15287 622 aa20.58■□□□□ 0.89
BRD9-212ENST00000495265 DDX46Q7L014 1031 aaKnown RBP20.58■□□□□ 0.89
BRD9-212ENST00000495265 UBXN4Q92575 508 aa20.58■□□□□ 0.89
BRD9-212ENST00000495265 SEC31AO94979 1220 aaKnown RBP20.58■□□□□ 0.88
BRD9-212ENST00000495265 ADALQ6DHV7 355 aa20.58■□□□□ 0.88
BRD9-212ENST00000495265 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.88
BRD9-212ENST00000495265 TMCO3Q6UWJ1 677 aa20.58■□□□□ 0.88
BRD9-212ENST00000495265 CHST3Q7LGC8 479 aa20.58■□□□□ 0.88
BRD9-212ENST00000495265 NCAPD2Q15021 1401 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 SETD1BQ9UPS6 1966 aaKnown RBP20.57■□□□□ 0.88
BRD9-212ENST00000495265 SALL1Q9NSC2 1324 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 TFCP2Q12800 502 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 CCDC9Q9Y3X0 531 aaKnown RBP20.57■□□□□ 0.88
BRD9-212ENST00000495265 DIP2AQ14689 1571 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
BRD9-212ENST00000495265 KCNJ6P48051 423 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 NCAPHQ15003 741 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 CLIC4Q9Y696 253 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 PLEKHG1Q9ULL1 1385 aa20.57■□□□□ 0.88
BRD9-212ENST00000495265 MAPK8IP2Q13387 824 aaPredicted RBP20.56■□□□□ 0.88
BRD9-212ENST00000495265 TNNI3KQ59H18 835 aa20.56■□□□□ 0.88
BRD9-212ENST00000495265 ISM2Q6H9L7 571 aa20.56■□□□□ 0.88
BRD9-212ENST00000495265 BPIFA3Q9BQP9 254 aa20.56■□□□□ 0.88
BRD9-212ENST00000495265 FPGT-TNNI3KV9GXZ4 949 aa20.56■□□□□ 0.88
BRD9-212ENST00000495265 LRRC59Q96AG4 307 aaKnown RBP20.56■□□□□ 0.88
BRD9-212ENST00000495265 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
BRD9-212ENST00000495265 ABCC6O95255 1503 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 ATP1A3P13637 1013 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 TRIM65Q6PJ69 517 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 NEK11Q8NG66 645 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 DBNDD2Q9BQY9 259 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 EPC1Q9H2F5 836 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
BRD9-212ENST00000495265 URI1O94763 535 aaPredicted RBP20.55■□□□□ 0.88
BRD9-212ENST00000495265 SF3A1Q15459 793 aaKnown RBP20.55■□□□□ 0.88
BRD9-212ENST00000495265 LINC00301Q8NCQ3 95 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 MNS1Q8NEH6 495 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 ARGLU1Q9NWB6 273 aaPredicted RBP20.55■□□□□ 0.88
BRD9-212ENST00000495265 PHLPP2Q6ZVD8 1323 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 SLIT1O75093 1534 aa20.55■□□□□ 0.88
BRD9-212ENST00000495265 A0A1W2PQ27 194 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 A0A1W2PQ64 194 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 A0A1W2PQD8 194 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 NRDCO43847 1150 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 POLR3DP05423 398 aaPredicted RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 HMGB1P09429 215 aaKnown RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 FDPSP14324 419 aaKnown RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 PDIA3P30101 505 aaKnown RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 FANCCQ00597 558 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 EXOSC10Q01780 885 aaKnown RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 STK38Q15208 465 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 CARD6Q9BX69 1037 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 LAMA4Q16363 1823 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 MRC1P22897 1456 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 TADA3O75528 432 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 GOLGA8FQ08AF8 430 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 GOLGA8DPQ0D2H9 430 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 DDX58O95786 925 aaKnown RBP20.54■□□□□ 0.88
BRD9-212ENST00000495265 NLRP12P59046 1061 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 PTPN21Q16825 1174 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 IP6K1Q92551 441 aa20.54■□□□□ 0.88
BRD9-212ENST00000495265 DPF2Q92785 391 aa20.53■□□□□ 0.88
BRD9-212ENST00000495265 ADAMTSL3P82987 1691 aa20.53■□□□□ 0.88
BRD9-212ENST00000495265 TUBB4AP04350 444 aa20.53■□□□□ 0.88
BRD9-212ENST00000495265 CEBPAP49715 358 aaPredicted RBP20.53■□□□□ 0.88
BRD9-212ENST00000495265 ZCCHC17Q9NP64 241 aaKnown RBP20.53■□□□□ 0.88
BRD9-212ENST00000495265 TPM4P67936 248 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms