RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 KCNJ4P48050 445 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 CCDC152Q4G0S7 254 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 GBP4Q96PP9 640 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
PRPF4B-209ENST00000494674 M0R2C6 588 aa12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 ARID4AP29374 1257 aaPredicted RBP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 TBC1D9BQ66K14 1250 aa12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 PDRG1Q9NUG6 133 aa12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
PRPF4B-209ENST00000494674 GNPATO15228 680 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 FOXP2O15409 715 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 CYP21A2P08686 494 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 PHKA1P46020 1223 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 LPIN2Q92539 896 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 ALDH8A1Q9H2A2 487 aaPredicted RBP12.72□□□□□ -0.37
PRPF4B-209ENST00000494674 TCHHQ07283 1943 aa12.71□□□□□ -0.37
PRPF4B-209ENST00000494674 RPS6KB1P23443 525 aa12.71□□□□□ -0.37
PRPF4B-209ENST00000494674 SLC10A5Q5PT55 438 aa12.71□□□□□ -0.37
PRPF4B-209ENST00000494674 CCDC102BQ68D86 513 aa12.71□□□□□ -0.37
PRPF4B-209ENST00000494674 SNAP23O00161 211 aa12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 TRAK2O60296 914 aa12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 BRD1O95696 1058 aa12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 ZFYP08048 801 aaPredicted RBP12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 HSPD1P10809 573 aaKnown RBP12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 PSMA5P28066 241 aa12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 STOX1Q6ZVD7 989 aa12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.38
PRPF4B-209ENST00000494674 A0A0G2JLW4 131 aa12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 TOB2Q14106 344 aaPredicted RBP12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 BLOC1S2Q6QNY1 142 aa12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 TPCN1Q9ULQ1 816 aa12.7□□□□□ -0.38
PRPF4B-209ENST00000494674 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 KRT32Q14532 448 aa12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 ME3Q16798 604 aa12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 APPBP2Q92624 585 aa12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 RTCBQ9Y3I0 505 aaKnown RBP12.69□□□□□ -0.38
PRPF4B-209ENST00000494674 CHD4Q14839 1912 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 SLC5A1P13866 664 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 ADD2P35612 726 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 CHRNDQ07001 517 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 BICDL1Q6ZP65 573 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 RASGRF1Q13972 1273 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 CHAMP1Q96JM3 812 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 NEK1Q96PY6 1258 aa12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 CDC5LQ99459 802 aaKnown RBP12.68□□□□□ -0.38
PRPF4B-209ENST00000494674 TCRBV5S4A2TA0A5A2 114 aa12.67□□□□□ -0.38
PRPF4B-209ENST00000494674 ZPR1O75312 459 aa12.67□□□□□ -0.38
PRPF4B-209ENST00000494674 TTF1Q15361 905 aaPredicted RBP12.67□□□□□ -0.38
PRPF4B-209ENST00000494674 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
PRPF4B-209ENST00000494674 NYXQ9GZU5 481 aa12.67□□□□□ -0.38
PRPF4B-209ENST00000494674 COL1A1P02452 1464 aaPredicted RBP12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 UBE3CQ15386 1083 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 SPATA5Q8NB90 893 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 CACNA1SQ13698 1873 aa12.66□□□□□ -0.38
PRPF4B-209ENST00000494674 GPAA1O43292 621 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 PDE6AP16499 860 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 PTMSP20962 102 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 NECAB1Q8N987 351 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 CELF1Q92879 486 aaKnown RBP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 LMBRD1Q9NUN5 540 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 BSDC1Q9NW68 430 aaPredicted RBP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms