RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
ERCC3-209ENST00000494464 THSD7BQ9C0I4 1608 aa16.6■□□□□ 0.25
ERCC3-209ENST00000494464 KLRK1P26718 216 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 KCNJ4P48050 445 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
ERCC3-209ENST00000494464 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-209ENST00000494464 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 SAMD7Q7Z3H4 446 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 API5Q9BZZ5 524 aaKnown RBP16.59■□□□□ 0.25
ERCC3-209ENST00000494464 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
ERCC3-209ENST00000494464 PCNTO95613 3336 aa16.58■□□□□ 0.24
ERCC3-209ENST00000494464 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
ERCC3-209ENST00000494464 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
ERCC3-209ENST00000494464 TBC1D10BQ4KMP7 808 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-209ENST00000494464 STRIP1Q5VSL9 837 aa16.58■□□□□ 0.24
ERCC3-209ENST00000494464 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
ERCC3-209ENST00000494464 ZNF594Q96JF6 807 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-209ENST00000494464 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
ERCC3-209ENST00000494464 TRAF5O00463 557 aa16.57■□□□□ 0.24
ERCC3-209ENST00000494464 EGFRP00533 1210 aa16.57■□□□□ 0.24
ERCC3-209ENST00000494464 DACT2Q5SW24 774 aa16.57■□□□□ 0.24
ERCC3-209ENST00000494464 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
ERCC3-209ENST00000494464 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-209ENST00000494464 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
ERCC3-209ENST00000494464 NOB1Q9ULX3 412 aaKnown RBP16.57■□□□□ 0.24
ERCC3-209ENST00000494464 TAF5LO75529 589 aa16.56■□□□□ 0.24
ERCC3-209ENST00000494464 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
ERCC3-209ENST00000494464 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
ERCC3-209ENST00000494464 USP17L8P0C7I0 530 aa16.55■□□□□ 0.24
ERCC3-209ENST00000494464 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
ERCC3-209ENST00000494464 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-209ENST00000494464 CD209Q9NNX6 404 aa16.55■□□□□ 0.24
ERCC3-209ENST00000494464 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
ERCC3-209ENST00000494464 SNAP23O00161 211 aa16.54■□□□□ 0.24
ERCC3-209ENST00000494464 MMP14P50281 582 aa16.54■□□□□ 0.24
ERCC3-209ENST00000494464 CST9Q5W186 159 aa16.54■□□□□ 0.24
ERCC3-209ENST00000494464 ZNF804AQ7Z570 1209 aa16.54■□□□□ 0.24
ERCC3-209ENST00000494464 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
ERCC3-209ENST00000494464 POLR2AP24928 1970 aaKnown RBP16.54■□□□□ 0.24
ERCC3-209ENST00000494464 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
ERCC3-209ENST00000494464 MYOZ2Q9NPC6 264 aa16.53■□□□□ 0.24
ERCC3-209ENST00000494464 GGA3Q9NZ52 723 aa16.53■□□□□ 0.24
ERCC3-209ENST00000494464 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
ERCC3-209ENST00000494464 TLL2Q9Y6L7 1015 aa16.53■□□□□ 0.24
ERCC3-209ENST00000494464 PITPNM2Q9BZ72 1349 aa16.53■□□□□ 0.24
ERCC3-209ENST00000494464 CELF2O95319 508 aaKnown RBP16.52■□□□□ 0.24
ERCC3-209ENST00000494464 NEFLP07196 543 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
ERCC3-209ENST00000494464 IL1R1P14778 569 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 DEFB115Q30KQ5 88 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 RBM26Q5T8P6 1007 aaKnown RBP16.52■□□□□ 0.24
ERCC3-209ENST00000494464 TTLL5Q6EMB2 1281 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 FBXW7Q969H0 707 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
ERCC3-209ENST00000494464 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
ERCC3-209ENST00000494464 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
ERCC3-209ENST00000494464 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.24
ERCC3-209ENST00000494464 VEGFBP49765 207 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 GTF2IP78347 998 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
ERCC3-209ENST00000494464 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 HDAC5Q9UQL6 1122 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 PLIN1O60240 522 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
ERCC3-209ENST00000494464 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
ERCC3-209ENST00000494464 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
ERCC3-209ENST00000494464 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
ERCC3-209ENST00000494464 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-209ENST00000494464 ADM5C9JUS6 153 aa16.5■□□□□ 0.23
ERCC3-209ENST00000494464 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
ERCC3-209ENST00000494464 TRIM27P14373 513 aa16.5■□□□□ 0.23
ERCC3-209ENST00000494464 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
ERCC3-209ENST00000494464 SCARF1Q14162 830 aa16.5■□□□□ 0.23
ERCC3-209ENST00000494464 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
ERCC3-209ENST00000494464 ANGEL2Q5VTE6 544 aaKnown RBP16.5■□□□□ 0.23
ERCC3-209ENST00000494464 SAPCD2Q86UD0 394 aa16.5■□□□□ 0.23
ERCC3-209ENST00000494464 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
ERCC3-209ENST00000494464 ECE1P42892 770 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 METTL24Q5JXM2 366 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 KLHDC4Q8TBB5 520 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 MEIS3Q99687 375 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 ZNF408Q9H9D4 720 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 HDAC9Q9UKV0 1011 aa16.49■□□□□ 0.23
ERCC3-209ENST00000494464 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
ERCC3-209ENST00000494464 PAPPA2Q9BXP8 1791 aa16.48■□□□□ 0.23
ERCC3-209ENST00000494464 BCAR3O75815 825 aa16.48■□□□□ 0.23
ERCC3-209ENST00000494464 PDE8BO95263 885 aa16.48■□□□□ 0.23
ERCC3-209ENST00000494464 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
ERCC3-209ENST00000494464 KIAA0825Q8IV33 1275 aa16.48■□□□□ 0.23
ERCC3-209ENST00000494464 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
ERCC3-209ENST00000494464 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
ERCC3-209ENST00000494464 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms