RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ADGRF5Q8IZF2 1346 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 SRCAPQ6ZRS2 3230 aa7.66□□□□□ -1.18
PTCD3-219ENST00000494323 NAIPQ13075 1403 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 FKBP5Q13451 457 aaPredicted RBP7.65□□□□□ -1.18
PTCD3-219ENST00000494323 GNASQ5JWF2 1037 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 TRIM22Q8IYM9 498 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 RHBDD1Q8TEB9 315 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 VTI1AQ96AJ9 217 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 GMCL1Q96IK5 515 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 TIMMDC1Q9NPL8 285 aa7.65□□□□□ -1.18
PTCD3-219ENST00000494323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTCD3-219ENST00000494323 NPHP3Q7Z494 1330 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 H7C1W4 665 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 TEAD4Q15561 434 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 WDR44Q5JSH3 913 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 TBCELQ5QJ74 424 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 KRT28Q7Z3Y7 464 aa7.64□□□□□ -1.19
PTCD3-219ENST00000494323 ZNF837Q96EG3 531 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-219ENST00000494323 C2orf49Q9BVC5 232 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-219ENST00000494323 NIFKQ9BYG3 293 aaKnown RBP7.64□□□□□ -1.19
PTCD3-219ENST00000494323 BCL9LQ86UU0 1499 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 ATRNO75882 1429 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 PTCH1Q13635 1447 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 SERTM1A2A2V5 107 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 SND1Q7KZF4 910 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTCD3-219ENST00000494323 UNC5CLQ8IV45 518 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 CABP1Q9NZU7 370 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 USP3Q9Y6I4 520 aa7.63□□□□□ -1.19
PTCD3-219ENST00000494323 HFM1A2PYH4 1435 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 PLEKHH1Q9ULM0 1364 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 HIRAP54198 1017 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-219ENST00000494323 SAFB2Q14151 953 aaKnown RBP eCLIP7.62□□□□□ -1.19
PTCD3-219ENST00000494323 DEFB132Q7Z7B7 95 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 ZNF295-AS1Q8N0V1 137 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 SVOPQ8N4V2 548 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 MPHOSPH9Q99550 1183 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 ZNF232Q9UNY5 417 aa7.62□□□□□ -1.19
PTCD3-219ENST00000494323 SPATA31A3Q5VYP0 1347 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 EML1O00423 815 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 F11P03951 625 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 NOS2P35228 1153 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 PHKA2P46019 1235 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 DBN1Q16643 649 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 MKNK1Q9BUB5 465 aa7.61□□□□□ -1.19
PTCD3-219ENST00000494323 RRBP1Q9P2E9 1410 aaKnown RBP7.61□□□□□ -1.19
PTCD3-219ENST00000494323 LRPPRCP42704 1394 aaKnown RBP7.6□□□□□ -1.19
PTCD3-219ENST00000494323 LAMC1P11047 1609 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 GPR25O00155 361 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 GAS6Q14393 721 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 C4orf17Q53FE4 359 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 TRERF1Q96PN7 1200 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 EGFL7Q9UHF1 273 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 PPLO60437 1756 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 MYOM2P54296 1465 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 PXDNQ92626 1479 aa7.6□□□□□ -1.19
PTCD3-219ENST00000494323 ABCC11Q96J66 1382 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 A0A1B0GTH6 734 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 FAM83GA6ND36 823 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 SCNN1AP37088 669 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 SRSF11Q05519 484 aaKnown RBP7.59□□□□□ -1.19
PTCD3-219ENST00000494323 NBPF1Q3BBV0 1214 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 ZNF385CQ66K41 422 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-219ENST00000494323 PMFBP1Q8TBY8 1022 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 GTPBP3Q969Y2 492 aaKnown RBP7.59□□□□□ -1.19
PTCD3-219ENST00000494323 NUCKS1Q9H1E3 243 aaKnown RBP7.59□□□□□ -1.19
PTCD3-219ENST00000494323 C14orf93Q9H972 538 aaKnown RBP7.59□□□□□ -1.19
PTCD3-219ENST00000494323 GPAMQ9HCL2 828 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 MBIPQ9NS73 344 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 SEPT3Q9UH03 358 aa7.59□□□□□ -1.19
PTCD3-219ENST00000494323 EP400Q96L91 3159 aa7.58□□□□□ -1.2
PTCD3-219ENST00000494323 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
PTCD3-219ENST00000494323 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
PTCD3-219ENST00000494323 PRAM1Q96QH2 718 aa7.58□□□□□ -1.2
PTCD3-219ENST00000494323 COL22A1Q8NFW1 1626 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-219ENST00000494323 CCDC144AA2RUR9 1427 aa7.58□□□□□ -1.2
PTCD3-219ENST00000494323 RALGAPBQ86X10 1494 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 RGPD8O14715 1765 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-219ENST00000494323 ABL1P00519 1130 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 SERPINB4P48594 390 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 VPS72Q15906 364 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 FAM182BQ5T319 152 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 C16orf46Q6P387 395 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 CAPN12Q6ZSI9 719 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 KRT27Q7Z3Y8 459 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 WHAMMQ8TF30 809 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-219ENST00000494323 FOXD4L4Q8WXT5 416 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-219ENST00000494323 MYO19Q96H55 970 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 HIRIP3Q9BW71 556 aaPredicted RBP7.57□□□□□ -1.2
PTCD3-219ENST00000494323 ZDHHC3Q9NYG2 299 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 POGKQ9P215 609 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 PARP3Q9Y6F1 533 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 PRAG1Q86YV5 1406 aa7.57□□□□□ -1.2
PTCD3-219ENST00000494323 YTHDC2Q9H6S0 1430 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms