RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 H7C1D1 291 aa16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 STRIP1Q5VSL9 837 aa16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 CST9Q5W186 159 aa16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 ZNF594Q96JF6 807 aaPredicted RBP16.74■□□□□ 0.27
SAPCD1-211ENST00000494299 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 SNAP23O00161 211 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 MMP14P50281 582 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 VGLL2Q8N8G2 317 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 THSD7BQ9C0I4 1608 aa16.73■□□□□ 0.27
SAPCD1-211ENST00000494299 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
SAPCD1-211ENST00000494299 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
SAPCD1-211ENST00000494299 IL1R1P14778 569 aa16.72■□□□□ 0.27
SAPCD1-211ENST00000494299 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
SAPCD1-211ENST00000494299 FMR1Q06787 632 aaKnown RBP eCLIP16.72■□□□□ 0.27
SAPCD1-211ENST00000494299 INTS3Q68E01 1043 aaKnown RBP16.72■□□□□ 0.27
SAPCD1-211ENST00000494299 TRAF5O00463 557 aa16.71■□□□□ 0.27
SAPCD1-211ENST00000494299 TAF5LO75529 589 aa16.71■□□□□ 0.27
SAPCD1-211ENST00000494299 UBE4AQ14139 1066 aa16.71■□□□□ 0.27
SAPCD1-211ENST00000494299 PUS3Q9BZE2 481 aaKnown RBP16.71■□□□□ 0.27
SAPCD1-211ENST00000494299 CD209Q9NNX6 404 aa16.71■□□□□ 0.27
SAPCD1-211ENST00000494299 MYO3BQ8WXR4 1341 aa16.7■□□□□ 0.26
SAPCD1-211ENST00000494299 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
SAPCD1-211ENST00000494299 TBC1D10BQ4KMP7 808 aaPredicted RBP16.7■□□□□ 0.26
SAPCD1-211ENST00000494299 CDC37L1Q7L3B6 337 aa16.7■□□□□ 0.26
SAPCD1-211ENST00000494299 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
SAPCD1-211ENST00000494299 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
SAPCD1-211ENST00000494299 USP17L8P0C7I0 530 aa16.69■□□□□ 0.26
SAPCD1-211ENST00000494299 FKBP1AP62942 108 aaKnown RBP16.69■□□□□ 0.26
SAPCD1-211ENST00000494299 ZBED3Q96IU2 234 aaPredicted RBP16.69■□□□□ 0.26
SAPCD1-211ENST00000494299 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
SAPCD1-211ENST00000494299 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
SAPCD1-211ENST00000494299 ARAP2Q8WZ64 1704 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 G3V3G9 751 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 TRIM27P14373 513 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 KIF4BQ2VIQ3 1234 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 IFFO2Q5TF58 517 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 HHIPL1Q96JK4 782 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 FAM205AQ6ZU69 1335 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 PITPNM2Q9BZ72 1349 aa16.68■□□□□ 0.26
SAPCD1-211ENST00000494299 BCAR3O75815 825 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 LRRC24Q50LG9 513 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 TTLL5Q6EMB2 1281 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 FAM84BQ96KN1 310 aaPredicted RBP16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 ECM29Q5VYK3 1845 aa16.67■□□□□ 0.26
SAPCD1-211ENST00000494299 ZBTB22O15209 634 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 PDE8BO95263 885 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 FGFR2P21802 821 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 VEGFBP49765 207 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 MTX1Q13505 466 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 ATF7IPQ6VMQ6 1270 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 SAPCD2Q86UD0 394 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 CERS5Q8N5B7 392 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 MTMR14Q8NCE2 650 aa16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 MKRN1Q9UHC7 482 aaKnown RBP16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 ASTN2O75129 1339 aaPredicted RBP16.66■□□□□ 0.26
SAPCD1-211ENST00000494299 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 SASH1O94885 1247 aa16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 KCNJ4P48050 445 aa16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 MEIS3Q99687 375 aa16.65■□□□□ 0.26
SAPCD1-211ENST00000494299 EYA2O00167 538 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 WNT10BO00744 389 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 GTF2IP78347 998 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 SCARF1Q14162 830 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 KRT26Q7Z3Y9 468 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 USP48Q86UV5 1035 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 GGA3Q9NZ52 723 aa16.64■□□□□ 0.25
SAPCD1-211ENST00000494299 CIAO1O76071 339 aa16.63■□□□□ 0.25
SAPCD1-211ENST00000494299 CELF2O95319 508 aaKnown RBP16.63■□□□□ 0.25
SAPCD1-211ENST00000494299 DLK2Q6UY11 383 aa16.63■□□□□ 0.25
SAPCD1-211ENST00000494299 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
SAPCD1-211ENST00000494299 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
SAPCD1-211ENST00000494299 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
SAPCD1-211ENST00000494299 NBPF9Q3BBW0 867 aa16.62■□□□□ 0.25
SAPCD1-211ENST00000494299 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
SAPCD1-211ENST00000494299 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
SAPCD1-211ENST00000494299 ADM5C9JUS6 153 aa16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 PLIN1O60240 522 aa16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 GNAI3P08754 354 aa16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms