RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 CACNA1FO60840 1977 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 RASSF10A6NK89 507 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 GRM8O00222 908 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 CCT4P50991 539 aaKnown RBP10.85□□□□□ -0.67
LRCH3-219ENST00000494069 DEFB115Q30KQ5 88 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 USP48Q86UV5 1035 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 HELBQ8NG08 1087 aaPredicted RBP10.85□□□□□ -0.67
LRCH3-219ENST00000494069 CHMP3Q9Y3E7 222 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 MYH3P11055 1940 aa10.85□□□□□ -0.67
LRCH3-219ENST00000494069 ANKRD18BA2A2Z9 1011 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 E9PSI1 815 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
LRCH3-219ENST00000494069 RPS12P25398 132 aaKnown RBP10.84□□□□□ -0.67
LRCH3-219ENST00000494069 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
LRCH3-219ENST00000494069 LMBR1LQ6UX01 489 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
LRCH3-219ENST00000494069 SSH1Q8WYL5 1049 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 KAZALD1Q96I82 304 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 ZNF594Q96JF6 807 aaPredicted RBP10.84□□□□□ -0.67
LRCH3-219ENST00000494069 MPHOSPH8Q99549 860 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
LRCH3-219ENST00000494069 ADM5C9JUS6 153 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 TAF5LO75529 589 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 ALDH1L1O75891 902 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 CHRNDQ07001 517 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 GRM1Q13255 1194 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 IFIT5Q13325 482 aaKnown RBP10.83□□□□□ -0.68
LRCH3-219ENST00000494069 KIF4BQ2VIQ3 1234 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 CYP4F22Q6NT55 531 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 CDC37L1Q7L3B6 337 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 SUCLG2Q96I99 432 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 GMLQ99445 158 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 SRCIN1Q9C0H9 1055 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 C9orf78Q9NZ63 289 aaPredicted RBP10.83□□□□□ -0.68
LRCH3-219ENST00000494069 SCAF8Q9UPN6 1271 aaKnown RBP10.83□□□□□ -0.68
LRCH3-219ENST00000494069 LEMD3Q9Y2U8 911 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 ZNF804BA4D1E1 1349 aa10.83□□□□□ -0.68
LRCH3-219ENST00000494069 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
LRCH3-219ENST00000494069 MED23Q9ULK4 1368 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 USP17L3A6NCW0 530 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 USP17L4A6NCW7 530 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 CCER2I3L3R5 266 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 FOXN1O15353 648 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 NBPF7P0C2Y1 421 aaPredicted RBP10.82□□□□□ -0.68
LRCH3-219ENST00000494069 ZNF280AP59817 542 aaPredicted RBP10.82□□□□□ -0.68
LRCH3-219ENST00000494069 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
LRCH3-219ENST00000494069 USP17L1Q7RTZ2 530 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 PODNQ7Z5L7 613 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 TRMT2AQ8IZ69 625 aaKnown RBP10.82□□□□□ -0.68
LRCH3-219ENST00000494069 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 TLL2Q9Y6L7 1015 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 IRS2Q9Y4H2 1338 aa10.82□□□□□ -0.68
LRCH3-219ENST00000494069 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 DACT2Q5SW24 774 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 KRT26Q7Z3Y9 468 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 SAPCD2Q86UD0 394 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 AGBL3Q8NEM8 1001 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 CAPNS2Q96L46 248 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 PUS3Q9BZE2 481 aaKnown RBP10.81□□□□□ -0.68
LRCH3-219ENST00000494069 ANKRD2Q9GZV1 360 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 COA1Q9GZY4 146 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 GGA3Q9NZ52 723 aa10.81□□□□□ -0.68
LRCH3-219ENST00000494069 POLR2AP24928 1970 aaKnown RBP10.8□□□□□ -0.68
LRCH3-219ENST00000494069 PLIN1O60240 522 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 AOC2O75106 756 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 USP17L8P0C7I0 530 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 KCNJ4P48050 445 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 SCARF1Q14162 830 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 CCDC57Q2TAC2 916 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 DCPSQ96C86 337 aaKnown RBP10.8□□□□□ -0.68
LRCH3-219ENST00000494069 MYOZ2Q9NPC6 264 aa10.8□□□□□ -0.68
LRCH3-219ENST00000494069 GTF2IP78347 998 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 TAF7LQ5H9L4 462 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 STRIP1Q5VSL9 837 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 ANGEL2Q5VTE6 544 aaKnown RBP10.79□□□□□ -0.68
LRCH3-219ENST00000494069 TTLL5Q6EMB2 1281 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 LDHAL6AQ6ZMR3 332 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
LRCH3-219ENST00000494069 CD209Q9NNX6 404 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 UTYO14607 1347 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 PSME4Q14997 1843 aa10.79□□□□□ -0.68
LRCH3-219ENST00000494069 ZNF609O15014 1411 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 HAX1O00165 279 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 NBPF9Q3BBW0 867 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 PRAMEF18Q5VWM3 479 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 MIER1Q8N108 512 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 CDCA5Q96FF9 252 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 ZIC5Q96T25 663 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 USP44Q9H0E7 712 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 CNNM1Q9NRU3 951 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 SMC4Q9NTJ3 1288 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 JAG2Q9Y219 1238 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 PTPRCP08575 1304 aa10.78□□□□□ -0.68
LRCH3-219ENST00000494069 ZNF646O15015 1829 aaPredicted RBP10.77□□□□□ -0.68
LRCH3-219ENST00000494069 ECE1P42892 770 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 LBX1P52954 281 aa10.77□□□□□ -0.69
LRCH3-219ENST00000494069 HUNKP57058 714 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms