RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 FLAD1Q8NFF5 587 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 ATL2Q8NHH9 583 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 UBN2Q6ZU65 1347 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 SPEF2Q9C093 1822 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 IRF6O14896 467 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 NTSR2O95665 410 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 RFC4P35249 363 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 LRRFIP1Q32MZ4 808 aaKnown RBP8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 SUSD4Q5VX71 490 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 SETDB2Q96T68 719 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 SIL1Q9H173 461 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 MROH5Q6ZUA9 1318 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 RIC1Q4ADV7 1423 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 ATG9AQ7Z3C6 839 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 EAF2Q96CJ1 260 aaPredicted RBP8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 MRRFQ96E11 262 aaKnown RBP8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 CDC5LQ99459 802 aaKnown RBP8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 LRP5O75197 1615 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 ITGA6P23229 1130 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 TFCP2Q12800 502 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 SEMA3FQ13275 785 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 SF3B3Q15393 1217 aaKnown RBP8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 TPTE2Q6XPS3 522 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 JARID2Q92833 1246 aaPredicted RBP8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 RILPL2Q969X0 211 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 RAD50Q92878 1312 aa8.07□□□□□ -1.12
FNDC3B-212ENST00000494000 DDX60Q8IY21 1712 aaKnown RBP8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 CHMLP26374 656 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 PMM1Q92871 262 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 ZNF609O15014 1411 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 UBR3Q6ZT12 1888 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 SEC24BO95487 1268 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 IGHMBP2P38935 993 aaKnown RBP8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 LDHAL6AQ6ZMR3 332 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 C4AP0C0L4 1744 aa8.06□□□□□ -1.12
FNDC3B-212ENST00000494000 PHF14O94880 888 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 TRIM37O94972 964 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 CCDC158Q5M9N0 1113 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 USPL1Q5W0Q7 1092 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 ZNF512BQ96KM6 892 aaPredicted RBP8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 ESYT1Q9BSJ8 1104 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 CNNM1Q9NRU3 951 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 CARMIL3Q8ND23 1372 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 MAMSTRQ6ZN01 415 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 PTF1AQ7RTS3 328 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 KLHDC4Q8TBB5 520 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 MPHOSPH8Q99549 860 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 MTA3Q9BTC8 594 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 CCDC8Q9H0W5 538 aaPredicted RBP8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 GREM2Q9H772 168 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 DIAPH3Q9NSV4 1193 aa8.05□□□□□ -1.12
FNDC3B-212ENST00000494000 TXNRD1Q16881 649 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 METTL24Q5JXM2 366 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 GET4Q7L5D6 327 aaPredicted RBP8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 NBPF5PQ86XG9 351 aaPredicted RBP8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 HAUS7Q99871 368 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 UQCRFS1P1P0C7P4 283 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 SNX21Q969T3 373 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 DBNLQ9UJU6 430 aaKnown RBP8.04□□□□□ -1.12
FNDC3B-212ENST00000494000 ARAP2Q8WZ64 1704 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 A0A1B0GUL7 405 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 SPDYE4A6NLX3 237 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 PDE8BO95263 885 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 RABEP1Q15276 862 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 LRRC24Q50LG9 513 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 TBC1D9BQ66K14 1250 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 LPIN2Q92539 896 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 IL17RAQ96F46 866 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 NEUROD6Q96NK8 337 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 SNRKQ9NRH2 765 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 APBA3O96018 575 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 SLC5A1P13866 664 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 PUM3Q15397 648 aaKnown RBP8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 ATP2B3Q16720 1220 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 CREBRFQ8IUR6 639 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 ANKRD18AQ8IVF6 992 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 LRRC4BQ9NT99 713 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 IVNS1ABPQ9Y6Y0 642 aa8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 TNS1Q9HBL0 1735 aaKnown RBP8.03□□□□□ -1.12
FNDC3B-212ENST00000494000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 VGLL3A8MV65 326 aa8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 SGSM2O43147 1006 aa8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 ZFYP08048 801 aaPredicted RBP8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 IFIT1P09914 478 aaKnown RBP8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 TTF1Q15361 905 aaPredicted RBP8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 TTC39AQ5SRH9 613 aa8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 ZNF594Q96JF6 807 aaPredicted RBP8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 DBNDD2Q9BQY9 259 aa8.02□□□□□ -1.12
FNDC3B-212ENST00000494000 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms