RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
ITGB1-216ENST00000493758 ZKSCAN3Q9BRR0 538 aa7.98□□□□□ -1.13
ITGB1-216ENST00000493758 PTPRAP18433 802 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 ORC1Q13415 861 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 PLA2G4EQ3MJ16 856 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 FBXO11Q86XK2 927 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 AEBP1Q8IUX7 1158 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 HOMEZQ8IX15 550 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 NACC1Q96RE7 527 aa7.97□□□□□ -1.13
ITGB1-216ENST00000493758 PDE2AO00408 941 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-216ENST00000493758 EIF1AYO14602 144 aaKnown RBP7.96□□□□□ -1.14
ITGB1-216ENST00000493758 IGHA1P01876 353 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 TRIM28Q13263 835 aaKnown RBP7.96□□□□□ -1.14
ITGB1-216ENST00000493758 TRAPPC3LQ5T215 181 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 KIAA0319Q5VV43 1072 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 CEP135Q66GS9 1140 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 ZSCAN29Q8IWY8 852 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-216ENST00000493758 WNT8BQ93098 351 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 CSRNP1Q96S65 589 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 POP1Q99575 1024 aaKnown RBP7.96□□□□□ -1.14
ITGB1-216ENST00000493758 SOX13Q9UN79 622 aa7.96□□□□□ -1.14
ITGB1-216ENST00000493758 TM4SF5O14894 197 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 DEAF1O75398 565 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-216ENST00000493758 ACPPP15309 386 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 COL19A1Q14993 1142 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 ENOX2Q16206 610 aaKnown RBP7.95□□□□□ -1.14
ITGB1-216ENST00000493758 ADAMTSL4Q6UY14 1074 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 IL22RA1Q8N6P7 574 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 TMC1Q8TDI8 760 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 NXPE3Q969Y0 559 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 OSMRQ99650 979 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 PPME1Q9Y570 386 aa7.95□□□□□ -1.14
ITGB1-216ENST00000493758 DLL1O00548 723 aa7.94□□□□□ -1.14
ITGB1-216ENST00000493758 CDC27P30260 824 aa7.94□□□□□ -1.14
ITGB1-216ENST00000493758 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-216ENST00000493758 PRPF40BQ6NWY9 871 aaKnown RBP7.94□□□□□ -1.14
ITGB1-216ENST00000493758 CCNJLQ8IV13 435 aa7.94□□□□□ -1.14
ITGB1-216ENST00000493758 DMRTC2Q8IXT2 367 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-216ENST00000493758 FBF1Q8TES7 1133 aa7.94□□□□□ -1.14
ITGB1-216ENST00000493758 NIF3L1Q9GZT8 377 aa7.94□□□□□ -1.14
ITGB1-216ENST00000493758 LATS2Q9NRM7 1088 aa7.94□□□□□ -1.14
ITGB1-216ENST00000493758 A0A1W2PP55 124 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 H3BRJ5 948 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 PROCP04070 461 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 EPHA1P21709 976 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 SETDB1Q15047 1291 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 USPL1Q5W0Q7 1092 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 LENG1Q96BZ8 264 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-216ENST00000493758 HHIPQ96QV1 700 aa7.93□□□□□ -1.14
ITGB1-216ENST00000493758 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
ITGB1-216ENST00000493758 CHRNA4P43681 627 aa7.92□□□□□ -1.14
ITGB1-216ENST00000493758 BSNDQ8WZ55 320 aa7.92□□□□□ -1.14
ITGB1-216ENST00000493758 CCDC74AQ96AQ1 378 aa7.92□□□□□ -1.14
ITGB1-216ENST00000493758 TCF12Q99081 682 aa7.92□□□□□ -1.14
ITGB1-216ENST00000493758 NPHS2Q9NP85 383 aa7.92□□□□□ -1.14
ITGB1-216ENST00000493758 C9orf172C9J069 976 aa7.91□□□□□ -1.14
ITGB1-216ENST00000493758 APBA3O96018 575 aa7.91□□□□□ -1.14
ITGB1-216ENST00000493758 SELPP16109 830 aa7.91□□□□□ -1.14
ITGB1-216ENST00000493758 PIP4K2BP78356 416 aa7.91□□□□□ -1.14
ITGB1-216ENST00000493758 NRG1Q02297 640 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-216ENST00000493758 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
ITGB1-216ENST00000493758 IGF2-ASQ6U949 168 aa7.91□□□□□ -1.14
ITGB1-216ENST00000493758 DNAJC14Q6Y2X3 702 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-216ENST00000493758 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
ITGB1-216ENST00000493758 SOX17Q9H6I2 414 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-216ENST00000493758 FAM177BA6PVY3 158 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 C1QTNF9BB2RNN3 333 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-216ENST00000493758 POLR3DP05423 398 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-216ENST00000493758 ITPKAP23677 461 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 CABP4P57796 275 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 ADGRE1Q14246 886 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 VN1R5Q7Z5H4 357 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 OSGEPQ9NPF4 335 aa7.9□□□□□ -1.14
ITGB1-216ENST00000493758 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
ITGB1-216ENST00000493758 PLCB3Q01970 1234 aa7.89□□□□□ -1.15
ITGB1-216ENST00000493758 MBTPS1Q14703 1052 aa7.89□□□□□ -1.15
ITGB1-216ENST00000493758 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
ITGB1-216ENST00000493758 LIN7BQ9HAP6 207 aa7.89□□□□□ -1.15
ITGB1-216ENST00000493758 TRAK1Q9UPV9 953 aa7.89□□□□□ -1.15
ITGB1-216ENST00000493758 FSCN2O14926 492 aa7.88□□□□□ -1.15
ITGB1-216ENST00000493758 ERCC3P19447 782 aa7.88□□□□□ -1.15
ITGB1-216ENST00000493758 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
ITGB1-216ENST00000493758 Q6ZS46 218 aa7.88□□□□□ -1.15
ITGB1-216ENST00000493758 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
ITGB1-216ENST00000493758 MSTNO14793 375 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 TRPA1O75762 1119 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 GRIK4Q16099 956 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 ALG1LQ6GMV1 187 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 TMEM130Q8N3G9 435 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 GALNT11Q8NCW6 608 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 GLIS3Q8NEA6 775 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 MRPL18Q9H0U6 180 aaKnown RBP7.87□□□□□ -1.15
ITGB1-216ENST00000493758 SEC31BQ9NQW1 1179 aa7.87□□□□□ -1.15
ITGB1-216ENST00000493758 SH2B1Q9NRF2 756 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-216ENST00000493758 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
ITGB1-216ENST00000493758 P4HBP07237 508 aaKnown RBP7.86□□□□□ -1.15
ITGB1-216ENST00000493758 GRIA4P48058 902 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms