RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 DISP2A7MBM2 1401 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 OFD1O75665 1012 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NPHP3-209ENST00000493732 EVCP57679 992 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 TTC6Q86TZ1 520 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 NLRP10Q86W26 655 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 FAM89AQ96GI7 184 aa11.37□□□□□ -0.59
NPHP3-209ENST00000493732 PUS3Q9BZE2 481 aaKnown RBP11.37□□□□□ -0.59
NPHP3-209ENST00000493732 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
NPHP3-209ENST00000493732 ATP2B3Q16720 1220 aa11.36□□□□□ -0.59
NPHP3-209ENST00000493732 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
NPHP3-209ENST00000493732 METTL24Q5JXM2 366 aa11.36□□□□□ -0.59
NPHP3-209ENST00000493732 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
NPHP3-209ENST00000493732 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
NPHP3-209ENST00000493732 LEO1Q8WVC0 666 aaPredicted RBP11.36□□□□□ -0.59
NPHP3-209ENST00000493732 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
NPHP3-209ENST00000493732 FUCA2Q9BTY2 467 aa11.36□□□□□ -0.59
NPHP3-209ENST00000493732 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
NPHP3-209ENST00000493732 PDE8AO60658 829 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 KDM4AO75164 1064 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 TPM2P07951 284 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 UQCRFS1P1P0C7P4 283 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 CTSWP56202 376 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 SCRN1Q12765 414 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 TTLL11Q8NHH1 800 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 HCLS1P14317 486 aaPredicted RBP11.35□□□□□ -0.59
NPHP3-209ENST00000493732 ITGA6P23229 1130 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 RESTQ13127 1097 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
NPHP3-209ENST00000493732 TNMDQ9H2S6 317 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
NPHP3-209ENST00000493732 PLCH1Q4KWH8 1693 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 GOLGA6L6A8MZA4 724 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
NPHP3-209ENST00000493732 CTAGE5O15320 804 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 GIMAP6Q6P9H5 292 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 OSBP2Q969R2 916 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
NPHP3-209ENST00000493732 MROH5Q6ZUA9 1318 aa11.34□□□□□ -0.59
NPHP3-209ENST00000493732 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 JAK2O60674 1132 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 PDIA3P30101 505 aaKnown RBP11.33□□□□□ -0.6
NPHP3-209ENST00000493732 TRDNQ13061 729 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 UBE3CQ15386 1083 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 RBM43Q6ZSC3 357 aaKnown RBP11.33□□□□□ -0.6
NPHP3-209ENST00000493732 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
NPHP3-209ENST00000493732 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 USP25Q9UHP3 1055 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 TBC1D2BQ9UPU7 963 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
NPHP3-209ENST00000493732 ITGB4P16144 1822 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 ANKRD36CQ5JPF3 1778 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 M0R2C6 588 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 ZNF213O14771 459 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 PDE8BO95263 885 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 ADCY5O95622 1261 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
NPHP3-209ENST00000493732 BICD2Q8TD16 824 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 RCOR1Q9UKL0 485 aa11.33□□□□□ -0.6
NPHP3-209ENST00000493732 ADORA1P30542 326 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 ZAP70P43403 619 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 DZIP3Q86Y13 1208 aaKnown RBP11.32□□□□□ -0.6
NPHP3-209ENST00000493732 LPIN2Q92539 896 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
NPHP3-209ENST00000493732 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 ATRNO75882 1429 aa11.32□□□□□ -0.6
NPHP3-209ENST00000493732 LAMA4Q16363 1823 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
NPHP3-209ENST00000493732 RIC1Q4ADV7 1423 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 FGAP02671 866 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 CHGBP05060 677 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
NPHP3-209ENST00000493732 HLFQ16534 295 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 PARP10Q53GL7 1025 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 ZNF34Q8IZ26 560 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 GREM2Q9H772 168 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 GPAA1O43292 621 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 LIG1P18858 919 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 GPTP24298 496 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
NPHP3-209ENST00000493732 ADD2P35612 726 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 TYRO3Q06418 890 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 LRRC2Q9BYS8 371 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
NPHP3-209ENST00000493732 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
NPHP3-209ENST00000493732 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
NPHP3-209ENST00000493732 MYH3P11055 1940 aa11.31□□□□□ -0.6
NPHP3-209ENST00000493732 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms