RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SNAP23O00161 211 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 SLC51AQ86UW1 340 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 TICAM2Q86XR7 235 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 EVI5LQ96CN4 794 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 FHDC1Q9C0D6 1143 aaPredicted RBP15.42■□□□□ 0.06
VPS52-220ENST00000493674 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 XDHP47989 1333 aa15.42■□□□□ 0.06
VPS52-220ENST00000493674 COL1A1P02452 1464 aaPredicted RBP15.41■□□□□ 0.06
VPS52-220ENST00000493674 LAMA4Q16363 1823 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 SEC24BO95487 1268 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 IFIT1P09914 478 aaKnown RBP15.41■□□□□ 0.06
VPS52-220ENST00000493674 ALDH1B1P30837 517 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 CCDC102BQ68D86 513 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 C15orf52Q6ZUT6 534 aaKnown RBP15.41■□□□□ 0.06
VPS52-220ENST00000493674 C2CD5Q86YS7 1000 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 SP8Q8IXZ3 490 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 BOLA2Q9H3K6 86 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 CD2APQ9Y5K6 639 aa15.41■□□□□ 0.06
VPS52-220ENST00000493674 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
VPS52-220ENST00000493674 UQCRFS1P1P0C7P4 283 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 CHMLP26374 656 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 PHKA1P46020 1223 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 SCARF1Q14162 830 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 SYT17Q9BSW7 474 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 LEMD3Q9Y2U8 911 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 MYH2Q9UKX2 1941 aa15.4■□□□□ 0.06
VPS52-220ENST00000493674 WTIPA6NIX2 430 aaPredicted RBP15.39■□□□□ 0.05
VPS52-220ENST00000493674 H0YIN7 160 aa15.39■□□□□ 0.05
VPS52-220ENST00000493674 MAP4K4O95819 1239 aaPredicted RBP15.39■□□□□ 0.05
VPS52-220ENST00000493674 MCAMP43121 646 aa15.39■□□□□ 0.05
VPS52-220ENST00000493674 DICER1Q9UPY3 1922 aaKnown RBP15.39■□□□□ 0.05
VPS52-220ENST00000493674 GPSM2P81274 684 aa15.38■□□□□ 0.05
VPS52-220ENST00000493674 GORABQ5T7V8 394 aa15.38■□□□□ 0.05
VPS52-220ENST00000493674 FBXO33Q7Z6M2 555 aa15.38■□□□□ 0.05
VPS52-220ENST00000493674 RILPL2Q969X0 211 aa15.38■□□□□ 0.05
VPS52-220ENST00000493674 PAG1Q9NWQ8 432 aa15.38■□□□□ 0.05
VPS52-220ENST00000493674 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
VPS52-220ENST00000493674 PDS5AQ29RF7 1337 aaKnown RBP15.38■□□□□ 0.05
VPS52-220ENST00000493674 FOCADQ5VW36 1801 aa15.38■□□□□ 0.05
VPS52-220ENST00000493674 MED23Q9ULK4 1368 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 KLRK1P26718 216 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 CHRNA5P30532 468 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 KBTBD3Q8NAB2 608 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 EDC3Q96F86 508 aaKnown RBP15.37■□□□□ 0.05
VPS52-220ENST00000493674 FAM84BQ96KN1 310 aaPredicted RBP15.37■□□□□ 0.05
VPS52-220ENST00000493674 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
VPS52-220ENST00000493674 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 EIF5BO60841 1220 aaKnown RBP15.36■□□□□ 0.05
VPS52-220ENST00000493674 KCNA3P22001 575 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 ATP2B4P23634 1241 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 BCAMP50895 628 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 RASGRF1Q13972 1273 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 PRPF40BQ6NWY9 871 aaKnown RBP15.36■□□□□ 0.05
VPS52-220ENST00000493674 DNAJC2Q99543 621 aaKnown RBP15.36■□□□□ 0.05
VPS52-220ENST00000493674 ESYT1Q9BSJ8 1104 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 SNRKQ9NRH2 765 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 HMG20BQ9P0W2 317 aa15.36■□□□□ 0.05
VPS52-220ENST00000493674 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 HIP1O00291 1037 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 GOLIM4O00461 696 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 SEMA3EO15041 775 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 ZAP70P43403 619 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 GYG1P46976 350 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 PI16Q6UXB8 463 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 TBC1D16Q8TBP0 767 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 ANKIB1Q9P2G1 1089 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 RAD50Q92878 1312 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 SBF1O95248 1867 aa15.35■□□□□ 0.05
VPS52-220ENST00000493674 CYP2E1P05181 493 aaPredicted RBP15.34■□□□□ 0.05
VPS52-220ENST00000493674 KCNJ4P48050 445 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 TGFB2P61812 414 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 SPATA5Q8NB90 893 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 ZNF622Q969S3 477 aaKnown RBP eCLIP15.34■□□□□ 0.05
VPS52-220ENST00000493674 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 IL25Q9H293 177 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 ANTXR1Q9H6X2 564 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 POLLQ9UGP5 575 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
VPS52-220ENST00000493674 SGSM2O43147 1006 aa15.33■□□□□ 0.04
VPS52-220ENST00000493674 UFL1O94874 794 aa15.33■□□□□ 0.04
VPS52-220ENST00000493674 DPEP1P16444 411 aa15.33■□□□□ 0.04
VPS52-220ENST00000493674 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
VPS52-220ENST00000493674 TBC1D32Q96NH3 1257 aa15.33■□□□□ 0.04
VPS52-220ENST00000493674 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.04
VPS52-220ENST00000493674 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
VPS52-220ENST00000493674 NSFL1CQ9UNZ2 370 aaKnown RBP15.33■□□□□ 0.04
VPS52-220ENST00000493674 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.04
VPS52-220ENST00000493674 UTRNP46939 3433 aa15.33■□□□□ 0.04
VPS52-220ENST00000493674 LAMB1P07942 1786 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms