RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 NIP7Q9Y221 180 aaKnown RBP eCLIP12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 ATRNO75882 1429 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 PDCP20941 246 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 GJB2P29033 226 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 ZAP70P43403 619 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
PHACTR4-204ENST00000493669 CHGBP05060 677 aa12.83□□□□□ -0.36
PHACTR4-204ENST00000493669 ST3GAL1Q11201 340 aa12.83□□□□□ -0.36
PHACTR4-204ENST00000493669 SLC5A1P13866 664 aa12.83□□□□□ -0.36
PHACTR4-204ENST00000493669 SCARF1Q14162 830 aa12.83□□□□□ -0.36
PHACTR4-204ENST00000493669 MCAMP43121 646 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 ZNF445P59923 1031 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 DHX32Q7L7V1 743 aaKnown RBP12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 OSBP2Q969R2 916 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 M0R2C6 588 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 F13A1P00488 732 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 CHMP4CQ96CF2 233 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 USP21Q9UK80 565 aa12.82□□□□□ -0.36
PHACTR4-204ENST00000493669 WASHC4Q2M389 1173 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 FOXD4L5Q5VV16 416 aaPredicted RBP12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 FOXD4L4Q8WXT5 416 aaPredicted RBP12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 AGXT2Q9BYV1 514 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 GRPEL1Q9HAV7 217 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 CSPP1Q1MSJ5 1256 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 BTAF1O14981 1849 aa12.81□□□□□ -0.36
PHACTR4-204ENST00000493669 ADD2P35612 726 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 Q6ZUG5 572 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 GPT2Q8TD30 523 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 NCLP19338 710 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 NECAB1Q8N987 351 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 E7EWF7 191 aa12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 CAVIN1Q6NZI2 390 aaKnown RBP12.8□□□□□ -0.36
PHACTR4-204ENST00000493669 RPS6KA4O75676 772 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 COL9A3Q14050 684 aaPredicted RBP12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 SLFNL1Q499Z3 407 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 TCEANC2Q96MN5 208 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 PHKA1P46020 1223 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 DOCK2Q92608 1830 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
PHACTR4-204ENST00000493669 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 NYXQ9GZU5 481 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 GPAA1O43292 621 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 PFKFB2O60825 505 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 FGD1P98174 961 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 PI16Q6UXB8 463 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
PHACTR4-204ENST00000493669 FOXP2O15409 715 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 SLC9C2Q5TAH2 1124 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 GAS2L3Q86XJ1 694 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 SPATA5Q8NB90 893 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 LY75O60449 1722 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 ZMYM6O95789 1325 aa12.77□□□□□ -0.36
PHACTR4-204ENST00000493669 BRF1Q92994 677 aa12.77□□□□□ -0.37
PHACTR4-204ENST00000493669 EVCP57679 992 aa12.77□□□□□ -0.37
PHACTR4-204ENST00000493669 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
PHACTR4-204ENST00000493669 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
PHACTR4-204ENST00000493669 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
PHACTR4-204ENST00000493669 FGAP02671 866 aa12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 PDE6AP16499 860 aa12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 ONECUT3O60422 494 aaPredicted RBP12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 ANKRD18AQ8IVF6 992 aa12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 HELBQ8NG08 1087 aaPredicted RBP12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
PHACTR4-204ENST00000493669 TCRBV5S4A2TA0A5A2 114 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms